CF838549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP185_ARATH (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 39/127 (30.71%), Postives = 74/127 (58.27%), Query Frame = 3 Query: 426 MDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERG-VEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQ--MDQKSVASWRAII 797 M+ AC +F ++ E + ++I G+V++ + EEAL ++++M G V+P+ T+ ++ AC+ L L EG QIH + K + + V ++L+NMY K ++ A +F + Q+ + SW ++I Sbjct: 280 MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMI 406
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11 Identity = 39/129 (30.23%), Postives = 64/129 (49.61%), Query Frame = 3 Query: 402 CALSHWGSMDYACSIFRQID----EPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 776 CA+ G+MD A S+ +++D P +N L+RG + KFEEA L EM RG++PDH ++ L +K K + + LGF L N+L+ K ++ E A + ++M + + Sbjct: 478 CAI---GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGI 603
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.138e-11 Identity = 34/126 (26.98%), Postives = 67/126 (53.17%), Query Frame = 3 Query: 420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 G + A +F +++ + +I+ + + EAL L+ +M ++GV P + ++ CA L +L+ G Q+H H+ + F+ D++V + L+ MY KC ++ A +F + K + W +II Sbjct: 279 GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSII 404
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR62_ARATH (Pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E34 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 8.016e-11 Identity = 38/144 (26.39%), Postives = 75/144 (52.08%), Query Frame = 3 Query: 369 NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKF-EEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 N C +++++ + G ++ A IF +N+++ GF + + + ++ +Y M G P+ TF ++ AC+ L + + G Q+H + K G + + +SL++MY KC + A +F QM +K+V SW ++I Sbjct: 205 NVVCCTSMIS--GYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346 The following BLAST results are available for this feature:
BLAST of CF838549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 184
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838549 ID=CF838549; Name=CF838549; organism=Citrus sinensis; type=EST; length=797bpback to top |