CF838549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.782e-18 Identity = 51/162 (31.48%), Postives = 88/162 (54.32%), Query Frame = 3 Query: 312 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +L + + HA +LK G + + ++ L+A+ S++ + A + + I +P + F+SLI K F +++ +++ MF G+ PD P LFK CA+L A K G QIH G + D FVQ S+ +MY +C ++ A +F +M K V + A++ Sbjct: 30 SLSKTTQAHARILKSGAQNDGYISAKLIAS--YSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALL 189 HSP 2 Score: 77.7962 bits (190), Expect = 7.746e-14 Identity = 42/134 (31.34%), Postives = 70/134 (52.24%), Query Frame = 3 Query: 408 LSHWGSMDYACSIFR----QIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 LS G +D A +F Q E + S+I G ++ K EAL L+ EM GV+P+H T P++ AC + AL G HG ++ ++ V ++LI+MY KC ++ + +F M K++ W +++ Sbjct: 328 LSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLM 461
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.327e-18 Identity = 47/155 (30.32%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 336 HAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLG-FEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 HAH++K+G +PF ++L++ + S G D+A +F ++ + ++I GFV++ EA+ + EM + GV + T ++ KA K++ ++ G +HG + G + D+F+ +SL++MYGKC + A +F +M ++V +W A+I Sbjct: 126 HAHIVKFGLDSDPFVRNSLISGYSSS--GLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALI 278 HSP 2 Score: 73.9442 bits (180), Expect = 1.119e-12 Identity = 47/178 (26.40%), Postives = 90/178 (50.56%), Query Frame = 3 Query: 276 EQECLTILKTCKNLEEFK---KVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 E +++LK +E+ + VH L+ G + F S+LV D A +F ++ + +LI G+V+ F++ + ++ EM + V P+ T ++ ACA + AL G ++H ++ K E + +LI++Y KC +E A +F+++ +K+V +W A+I Sbjct: 204 EMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM--YGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMI 379 HSP 3 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 53/176 (30.11%), Postives = 76/176 (43.18%), Query Frame = 3 Query: 282 ECLTILKTCKNLEEFKKVHAHVLKWGFFWN--PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEAL--FLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 E T+L + K++H +L F+ S L+ C + YA + Q+ ++SLI F + L Y M GV P TFP L KA KL+ Q H H+ K G + D FV+NSLI+ Y +FAS +F + K V +W A+I Sbjct: 3 ELKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAAT-QFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMI 176
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP237_ARATH (Pentatricopeptide repeat-containing protein At3g16610 OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.327e-18 Identity = 55/179 (30.73%), Postives = 96/179 (53.63%), Query Frame = 3 Query: 288 LTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCA----SNLVATCALSHWGSMDYACSIFRQIDEP--GAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L++L+TC +NL + +H H+LK + + L A+C ++ A +F +I P ++ +IR + + E+AL LY +M GV P +T+P + KACA L+A+ +G IH HV F D++V +L++ Y KC ++E A +F +M ++ + +W A+I Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASC-----NEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176 HSP 2 Score: 88.5817 bits (218), Expect = 4.388e-17 Identity = 51/158 (32.28%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 333 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD---FNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 VH + +K GF + + +++ A +GS+ C FRQ E G D +NSLI G V + + EE+ L++EM G+ PD T + AC+ L AL G HG+ G+ + + N+L++MY KC K++ A +F M ++ + SW ++ Sbjct: 330 VHCYAVKAGFILDLTVQNTIISFYA--KYGSL---CDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTML 482 HSP 3 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 45/172 (26.16%), Postives = 88/172 (51.16%), Query Frame = 3 Query: 294 ILKTCKNL---EEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFE-RGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +LK C L ++ K +H+HV F + + + LV A G ++ A +F ++ + +N++I GF + + L+ +M G+ P+ T +F A + AL+EG +HG+ ++GF DL V+ ++++Y K + + +A +F +K+ +W A+I Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKC--GELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMI 278
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.039e-18 Identity = 47/126 (37.30%), Postives = 73/126 (57.94%), Query Frame = 3 Query: 420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 G +D A +F ++ E + ++I GFVK EEAL + EM GV+PD+ A AC L AL G+ +H +V F+ ++ V NSLI++Y +C VEFA +F M++++V SW ++I Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVI 279
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.039e-18 Identity = 53/175 (30.29%), Postives = 93/175 (53.14%), Query Frame = 3 Query: 279 QECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVE--PDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 Q L +++ + K +H HV+ G + S L T AL G + YA +F ++ + +N +IR +V++ + +A+ ++ M GV+ PD +T+P + KA +L+++K G+ +HG + + F D +VQN+L+ MY KVE A +F M + V SW +I Sbjct: 19 QSLLNHFAATQSISKTKALHCHVITGGRV-SGHILSTLSVTYALC--GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190 HSP 2 Score: 73.9442 bits (180), Expect = 1.119e-12 Identity = 39/155 (25.16%), Postives = 82/155 (52.90%), Query Frame = 3 Query: 333 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 VH +L+ F + + + L+A ++G ++ A +F + +N++I G+ ++ +AL +++ M V+ DH T ++ C L+ L+ G +H V + + V+N+L+NMY KC +++ A +F +M+++ V +W +I Sbjct: 139 VHGRILRSWFGRDKYVQNALLAM--YMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMI 291 HSP 3 Score: 68.5514 bits (166), Expect = 4.700e-11 Identity = 36/126 (28.57%), Postives = 59/126 (46.83%), Query Frame = 3 Query: 420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 G MD A +F +++ + +I G+ +D E AL L M GV P+ T +L C + +G +HG + D+ ++ SLI+MY KC++V+ +F + W AII Sbjct: 267 GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAII 392
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.969e-18 Identity = 54/172 (31.40%), Postives = 88/172 (51.16%), Query Frame = 3 Query: 291 TILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +ILKTC +LE +++H+ ++K F N + S L+ A G +D A I + + ++I G+ + ++AL + +M +RG+ D ACA LQALKEG QIH GF DL QN+L+ +Y +C K+E + F+Q + +W A++ Sbjct: 495 SILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYA--KLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664 HSP 2 Score: 88.1965 bits (217), Expect = 5.732e-17 Identity = 52/172 (30.23%), Postives = 90/172 (52.33%), Query Frame = 3 Query: 291 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 ++L CK +E + ++H VLK GF + + + LV+ H G++ A IF + + A +N+LI G + E+A+ L+ M G+EPD T +L AC+ L G Q+H + KLGF + ++ +L+N+Y KC +E A F + + ++V W ++ Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSL--YFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVML 462 HSP 3 Score: 83.9593 bits (206), Expect = 1.081e-15 Identity = 51/162 (31.48%), Postives = 87/162 (53.70%), Query Frame = 3 Query: 315 LEEFKKVHAHVLKWGFFWN-PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L+E +++HA GF + PF N + T S G ++ + F Q + +N+L+ GF + EEAL ++ M G++ ++FTF + KA ++ +K+G Q+H + K G++ + V N+LI+MY KC + A F ++ K+ SW AII Sbjct: 607 LKEGQQIHAQACVSGFSSDLPF--QNALVTL-YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765 HSP 4 Score: 75.0998 bits (183), Expect = 5.021e-13 Identity = 46/172 (26.74%), Postives = 87/172 (50.58%), Query Frame = 3 Query: 294 ILKTCKN----LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +L+ C+ + +++HA +L G + + L+ S G +D A +F + + ++I G K+ EA+ L+ +M+ G+ P + F ++ AC K+++L+ G Q+HG V KLGF D +V N+L+++Y + A IF M Q+ ++ +I Sbjct: 192 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDL--YSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 5.184e-18 Identity = 53/188 (28.19%), Postives = 97/188 (51.60%), Query Frame = 3 Query: 255 ELNLRLKEQECLTILKTCKNLEEF------KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERG-VEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 E+ L + +CLT++ L + + V L+ G+F N V + G +D A ++F + +N++I G+ ++ EA+ +YN M E G + + T+ ++ AC++ AL++GM++HG + K G D+FV SL +MYGKC ++E A ++F Q+ + + W +I Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM-YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 524 HSP 2 Score: 82.4185 bits (202), Expect = 3.145e-15 Identity = 47/169 (27.81%), Postives = 87/169 (51.48%), Query Frame = 3 Query: 291 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 ++LK C+ + + K+H LK+GF W+ + A++L+ S + ++ A +F ++ +N++I G+ + +EAL L N + D T +L AC + G+ IH + K G E +LFV N LI++Y + ++ +F +M + + SW +II Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHL--YSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSII 320 HSP 3 Score: 75.0998 bits (183), Expect = 5.021e-13 Identity = 48/170 (28.24%), Postives = 87/170 (51.18%), Query Frame = 3 Query: 291 TILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNE-MFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 T+ + C NL+ K +HA ++ N ++ LV + G++ A F I + +N +I G+ + E + ++ M G+ PD+ TFP++ KAC + + +G +IH K GF +D++V SLI++Y + + V A +F +M + + SW A+I Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYC--YLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18 Identity = 53/161 (32.92%), Postives = 87/161 (54.04%), Query Frame = 3 Query: 315 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L K++H + LK F +N A+ VA+ A GS+ YA +F I +N+LI G + +L + +M G+ PD FT +L AC+KL++L+ G ++HG + + E DLFV S++++Y C ++ A+F M+ KS+ SW +I Sbjct: 411 LPSLKELHCYSLKQEFVYNELVANAFVASYAKC--GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVI 569 HSP 2 Score: 78.5666 bits (192), Expect = 4.541e-14 Identity = 41/127 (32.28%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 420 GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFER-GVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 GS D + +F + F +N++I + ++ ++E L + EM + PDHFT+P + KACA + + G+ +HG V K G D+FV N+L++ YG V A +F M ++++ SW ++I Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMI 260 HSP 3 Score: 74.3294 bits (181), Expect = 8.565e-13 Identity = 50/175 (28.57%), Postives = 82/175 (46.86%), Query Frame = 3 Query: 294 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVE----PDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 ++K C + + VH V+K G + F + LV+ G + A +F + E +NS+IR F + EE+ L EM E + PD T + CA+ + + G +HG KL + +L + N+L++MY KC + A IFK + K+V SW ++ Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH--GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMV 365 HSP 4 Score: 70.4774 bits (171), Expect = 1.237e-11 Identity = 43/172 (25.00%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 291 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 ++L C L+ K+VH +++ + F ++++ H G + ++F +++ +N++I G++++ + AL ++ +M G++ + +F AC+ L +L+ G + H + K E D F+ SLI+MY K + +S +F + +KS ASW A+I Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYI--HCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP430_ARATH (Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 52/162 (32.10%), Postives = 89/162 (54.94%), Query Frame = 3 Query: 315 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEF-ASAIFKQMDQKSVASWRAII 797 LE K +H++++ G N ++LV S + M+ A + E F + S++ GFV++++ +EA+ + EM G++P++FT+ A+ C+ +++L G QIH K+GFE V N+L++MY KC E AS +F M +V SW +I Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDF--YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399 HSP 2 Score: 89.7373 bits (221), Expect = 1.970e-17 Identity = 52/178 (29.21%), Postives = 89/178 (50.00%), Query Frame = 3 Query: 276 EQECLTILKTCKNLEEFKKVHAH--VLKWGFFWNPFCASNLVATCALSH--WGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 ++ C+ IL C++ +H H V+K+G N +NL++ + W A +F ++ F + +I F K +F AL L+ EM G P+ FTF ++ ++CA L+ + G ++HG V K GFE + V +SL ++Y KC + + A +F + SW +I Sbjct: 24 QKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWN----ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197 HSP 3 Score: 84.3445 bits (207), Expect = 8.276e-16 Identity = 51/171 (29.82%), Postives = 83/171 (48.54%), Query Frame = 3 Query: 294 ILKTCKNLEEFKKV---HAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +L+ C L ++V HA++L+ ++LV A S +DYA ++ R + + SL+ F + K E AL + N M+ G+ D + P A A L AL+ G +H + K GF V NSL++MY KC +E A +F+++ V SW ++ Sbjct: 433 VLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSR--KVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLV 601 HSP 4 Score: 77.7962 bits (190), Expect = 7.746e-14 Identity = 47/172 (27.33%), Postives = 83/172 (48.26%), Query Frame = 3 Query: 291 TILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +++++C L + +VH V+K GF N S+L + S G AC +F + + +I V K+ EAL Y+EM + GV P+ FTF L A + L L+ G IH ++ G ++ ++ SL++ Y + K+E A + ++ V W +++ Sbjct: 129 SVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSL--SDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVV 297 HSP 5 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 39/170 (22.94%), Postives = 86/170 (50.59%), Query Frame = 3 Query: 288 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L++ ++L+ K++H+ +K GF + N + + S A +F + P + +LI G V ++ L EM +R VEP+ T + +AC+KL+ ++ ++IH ++ + + ++ V NSL++ Y KV++A + + M ++ ++ +++ Sbjct: 332 LSLCSAVRSLDFGKQIHSQTIKVGFE-DSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLV 500
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP220_ARATH (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17 Identity = 53/170 (31.18%), Postives = 86/170 (50.59%), Query Frame = 3 Query: 288 LTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L+ + NL+ VHA +K G N + S+LV+ S M+ A +F ++E +N++IRG+ + + + + L+ +M G D FTF +L CA L+ G Q H + K +LFV N+L++MY KC +E A IF++M + +W II Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM--YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTII 501 HSP 2 Score: 85.5001 bits (210), Expect = 3.715e-16 Identity = 54/175 (30.86%), Postives = 90/175 (51.43%), Query Frame = 3 Query: 291 TILKTCKNLEEFK---KVHAHVLKWGFFWN-PFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFD-FNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKS-VASWRAII 797 TI++ C E + H + K GF + +L+ S M AC++F ++ P + + ++ G ++ +EEAL Y EM GV PD TF + + C+ L +L+EG IH +F L + D N+LI+MY KC ++ +S +F +M ++S V SW ++I Sbjct: 634 TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR--GMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLI 806 HSP 3 Score: 75.0998 bits (183), Expect = 5.021e-13 Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 3 Query: 291 TILKTCK---NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 ++L TC +LE + H+ ++K N F + LV A G+++ A IF ++ + +N++I +V+D EA L+ M G+ D + KAC + L +G Q+H K G + DL +SLI+MY KC ++ A +F + + SV S A+I Sbjct: 433 SLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC--GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALI 602 HSP 4 Score: 75.0998 bits (183), Expect = 5.021e-13 Identity = 55/177 (31.07%), Postives = 88/177 (49.72%), Query Frame = 3 Query: 285 CL-TILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYD-LFVQNSLINMYGKCEKVEFASAIFKQMDQ-KSVASWRAII 797 CL + LK C + L + K+VH +K G + S+L+ S G + A +F + E N+LI G+ ++ EEA+ L+ EM RGV P TF + +AC K ++L G Q HG + K GF + ++ SL+ MY + A A+F ++ KS+ W ++ Sbjct: 531 CLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM--YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMM 704 The following BLAST results are available for this feature:
BLAST of CF838549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 184
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838549 ID=CF838549; Name=CF838549; organism=Citrus sinensis; type=EST; length=797bpback to top |