CF838549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.508e-17 Identity = 71/261 (27.20%), Postives = 120/261 (45.98%), Query Frame = 3 Query: 39 LMDDIPFFLKVMYFSCSFSSSHFTKTCS*LMLCREQQS*-----LINNGVDSSSMTRTSVLHQSLLLTQPEEPPKGPELNLRLKEQECLTILKTCKNLEE---FKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L+DD+ L MY CS S C + E S LI + + ++ ++ S ++TQ P + + K C NL + K+V K G N A+++++ S M+ A F + E +N+ + G +++ FE+A L +E+ ER + FTF +L A + ++++G QIH V KLG + V N+LI+MY KC ++ AS +F M+ ++V SW ++I Sbjct: 300 LVDDVECSLVDMYAKCSADGS--VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS---------SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD--RMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMI 547 HSP 2 Score: 68.1662 bits (165), Expect = 6.138e-11 Identity = 48/178 (26.97%), Postives = 83/178 (46.63%), Query Frame = 3 Query: 285 CLT-ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCE---KVEFASAIFKQMDQKSVASWRAII 797 C T +++ C N + + ++K G F + C + + S + A +F ++ E + +I ++ EA+ + +M G E D FT ++F ACA+L+ L G Q+H + G D V+ SL++MY KC V+ +F +M+ SV SW A+I Sbjct: 168 CYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALI 343
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP350_ARATH (Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17 Identity = 45/124 (36.29%), Postives = 77/124 (62.10%), Query Frame = 3 Query: 426 MDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 M+ A +F ++++ AF +N +I+GF + EA+ Y+ M GV+ D FT+P + K+ A + +L+EG +IH V KLGF D++V NSLI++Y K A +F++M ++ + SW ++I Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI 203 HSP 2 Score: 85.8853 bits (211), Expect = 2.845e-16 Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 3 Query: 312 NLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEY-DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +LEE KK+HA V+K GF + + ++L++ G A +F ++ E +NS+I G++ +L L+ EM + G +PD F+ + AC+ + + K G +IH H + E D+ V S+++MY K +V +A IF M Q+++ +W +I Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISL--YMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305 HSP 3 Score: 78.1814 bits (191), Expect = 5.931e-14 Identity = 45/159 (28.30%), Postives = 78/159 (49.06%), Query Frame = 3 Query: 321 EFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 E + +H + ++ GF P G + A IF ++ E +NS+I +V++ K AL L+ E+++ + PD T ++ A A+ +L EG +IH ++ K + + + NSL++MY C +E A F + K V SW +II Sbjct: 348 EGRTIHGYAMRRGFL--PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSII 504 HSP 4 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 42/130 (32.31%), Postives = 73/130 (56.15%), Query Frame = 3 Query: 411 SHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFER-GVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 S +G + YA IF + + +N +I + ++ + +A + +M E+ G++PD T L A A L EG IHG+ + GF + ++ +LI+MYG+C +++ A IF +M +K+V SW +II Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSII 403
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17 Identity = 49/170 (28.82%), Postives = 87/170 (51.18%), Query Frame = 3 Query: 297 LKTCKNLEEFKKVHAHVLKW--GFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG-AFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L CK+L K++HAH+L+ N F + V++ +++ + YA ++F I P + FN +R + + + Y + G D F+F + KA +K+ AL EGM++HG FK+ D FV+ ++MY C ++ +A +F +M + V +W +I Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSIN----LSYALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMI 184 HSP 2 Score: 77.411 bits (189), Expect = 1.012e-13 Identity = 44/149 (29.53%), Postives = 79/149 (53.02%), Query Frame = 3 Query: 363 FWNPFCASNLVATCAL----SHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 F+ NL + A+ S G +D A IF Q ++ + ++I +V+ +EAL ++ EM G++PD + ++ ACA L L + +H + G E +L + N+LINMY KC ++ +F++M +++V SW ++I Sbjct: 269 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMI 417
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370 OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17 Identity = 49/157 (31.21%), Postives = 84/157 (53.50%), Query Frame = 3 Query: 327 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 K++HA VLK + N + + G M A I RQ++ +NSLI+G+V+++ ++EAL +++M G + D + ++ A +L L GM++H +V K G++ +L V N+LI+MY KC + F +M K + SW +I Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAM-YTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVI 459 HSP 2 Score: 80.1073 bits (196), Expect = 1.561e-14 Identity = 53/173 (30.64%), Postives = 93/173 (53.76%), Query Frame = 3 Query: 294 ILKTC---KNLEEFKKVHAHVLK-WGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVA-SWRAII 797 +L+ C + + + +++H+ + K + F F A LV GS+D A +F ++ + AF +N++I +V + + AL LY M GV +FPAL KACAKL+ ++ G ++H + KLG+ F+ N+L++MY K + + A +F +K A W +I+ Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFM--YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 256 HSP 3 Score: 73.1738 bits (178), Expect = 1.908e-12 Identity = 51/173 (29.48%), Postives = 84/173 (48.55%), Query Frame = 3 Query: 294 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG-AFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLG-FEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +LK C L + + ++H+ ++K G+ F + LV+ A + + A +F E G A +NS++ + K E L L+ EM G P+ +T + AC K G +IH V K +L+V N+LI MY +C K+ A I +QM+ V +W ++I Sbjct: 188 LLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND--DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLI 358 HSP 4 Score: 70.4774 bits (171), Expect = 1.237e-11 Identity = 43/166 (25.90%), Postives = 89/166 (53.61%), Query Frame = 3 Query: 312 NLEEFKKVHAHVLKWGFFWNPFCASNL-VATCALSHWGSMDYACSI---FRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 NL ++HA+V+K G W+ SNL V + + + C + F ++ + + ++I G+ ++ EAL L+ ++ ++ +E D ++ +A + L+++ +IH H+ + G D +QN L+++YGKC + +A+ +F+ + K V SW ++I Sbjct: 401 NLLAGMELHAYVIKHG--WD----SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMI 559
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP255_ARATH (Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17 Identity = 49/165 (29.70%), Postives = 93/165 (56.36%), Query Frame = 3 Query: 312 NLEEFKKV---HAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +L F+K+ H + +K G + + ++ ++ + +G + YA +F ++ + + +N++I G+ K E+A L+ M G + D ++F L K A ++ G Q+HG V K G+E +++V +SL++MY KCE+VE A FK++ + + SW A+I Sbjct: 12 SLNSFQKLSLTHCYAIKCGSISDIYVSNRILDSYI--KFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALI 174 HSP 2 Score: 83.5741 bits (205), Expect = 1.412e-15 Identity = 50/158 (31.65%), Postives = 81/158 (51.27%), Query Frame = 3 Query: 327 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQK-SVASWRAII 797 K +H V+K G + L++ G+M+ A S+F + +NS+I GF + E+A+ ++ + ++ D + F AL ++C+ L L+ G QIH K GF + FV +SLI MY KC +E A F+Q+ K S +W A+I Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17 Identity = 49/156 (31.41%), Postives = 78/156 (50.00%), Query Frame = 3 Query: 330 KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +VHA +K GF NPF + V + +D AC +F +I E + FN+LI G+ KD + E++ L+ +M + G +P FTF + KA L G Q+H GF D V N +++ Y K ++V +F +M + S+ +I Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323 HSP 2 Score: 70.0922 bits (170), Expect = 1.615e-11 Identity = 37/118 (31.36%), Postives = 61/118 (51.69%), Query Frame = 3 Query: 444 IFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +F ++ E +N +I + + ++E +L + EM G + +F F + A L +L+ G Q+H + L V NSL++MY KCE E A IFK + Q++ SW A+I Sbjct: 307 LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALI 424
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP192_ARATH (Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17 Identity = 50/154 (32.47%), Postives = 81/154 (52.60%), Query Frame = 3 Query: 336 HAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 H LK GF + + S+LV S G ++ A +F ++ E + ++I GF ++ + + L LY++M + +P+ +TF AL AC AL +G +H +G + L + NSLI+MY KC ++ A IF Q K V SW ++I Sbjct: 143 HCLALKGGFISDVYLGSSLVVLYRDS--GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMI 294
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17 Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 3 Query: 444 IFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEY------DLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +F ++ E +N+LI G+ ++ + EEAL L+ + V P H++F + KACA L L GMQ H HV K GF++ D+FV NSLI+MY KC VE +F++M ++ SW A+I Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMI 465 HSP 2 Score: 88.5817 bits (218), Expect = 4.388e-17 Identity = 47/165 (28.48%), Postives = 89/165 (53.94%), Query Frame = 3 Query: 306 CKNLEEFKKVHAHVLKWGFF-WNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 C +LE+ ++V + + + WN L+ G +D A S+FR + E +NS++ GF + + EEAL + M + G + ++F ++ AC+ L + +G+Q+H + K F D+++ ++L++MY KC V A +F +M ++V SW ++I Sbjct: 68 CGSLEDGRQVFDKMPQRNIYTWNS-------VVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225 HSP 3 Score: 87.8113 bits (216), Expect = 7.486e-17 Identity = 55/180 (30.56%), Postives = 92/180 (51.11%), Query Frame = 3 Query: 270 LKEQECLTILKTCKNLEEFKK---VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLG-FEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L E ++L C L + K VH+ + K F + + S LV S G+++ A +F ++ + +NSLI F ++ EAL ++ M E VEPD T ++ ACA L A+K G ++HG V K D+ + N+ ++MY KC +++ A IF M ++V + ++I Sbjct: 150 LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDM--YSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMI 327
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP431_ARATH (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.573e-17 Identity = 53/155 (34.19%), Postives = 83/155 (53.55%), Query Frame = 3 Query: 333 VHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 VH +V+K G F AS+L G +D A +F +I + A +N+L+ G+V++ K EEA+ L+++M ++GVEP T A A + ++EG Q H G E D + SL+N Y K +E+A +F +M +K V +W II Sbjct: 195 VHGYVVKSGLEDCVFVASSLADM--YGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLII 347 HSP 2 Score: 87.0409 bits (214), Expect = 1.277e-16 Identity = 57/184 (30.98%), Postives = 99/184 (53.80%), Query Frame = 3 Query: 261 NLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFW--NPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 NLR+ + IL+ C ++L K++HA +LK G F+ N + + LV A +++ A +F ++ F + ++I + E AL + EM E + PD+F P + KAC L+ + G +HG+V K G E +FV +SL +MYGKC ++ AS +F ++ ++ +W A++ Sbjct: 65 NLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCD--ALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALM 246 HSP 3 Score: 68.5514 bits (166), Expect = 4.700e-11 Identity = 43/180 (23.89%), Postives = 86/180 (47.78%), Query Frame = 3 Query: 267 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 R+ CL+ +EE K+ HA + N N++ T L+ + G ++YA +F ++ E +N +I G+V+ E+A+++ M ++ D T L A A+ + LK G ++ + + FE D+ + +++++MY KC + A +F +K + W ++ Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIV-----NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLL 448
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.573e-17 Identity = 50/166 (30.12%), Postives = 87/166 (52.41%), Query Frame = 3 Query: 306 CKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQI--DEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 CK + + K +H +L +G S+L++T G + +A S+ R+ + G + +NSLIR + + + L+L+ M PD++TFP +FKAC ++ +++ G H GF ++FV N+L+ MY +C + A +F +M V SW +II Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNL-TSHLISTYISV--GCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII 200 HSP 2 Score: 75.0998 bits (183), Expect = 5.021e-13 Identity = 51/172 (29.65%), Postives = 79/172 (45.93%), Query Frame = 3 Query: 294 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMF-ERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 + K C + + HA L GF N F + LVA S S+ A +F ++ +NS+I + K K + AL +++ M E G PD+ T + CA L G Q+H ++FV N L++MY KC ++ A+ +F M K V SW A++ Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAM--YSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302 The following BLAST results are available for this feature:
BLAST of CF838549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 184
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838549 ID=CF838549; Name=CF838549; organism=Citrus sinensis; type=EST; length=797bpback to top |