CF838549
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.178e-16 Identity = 47/174 (27.01%), Postives = 85/174 (48.85%), Query Frame = 3 Query: 273 KEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAI 794 K Q+ T++ + K++H ++ + F + L+ + Y+ +F P F +NSLI GFV + F E L L+ + + G+ FTFP + KAC + + K G+ +H V K GF +D+ SL+++Y ++ A +F ++ +SV +W A+ Sbjct: 12 KVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLF--FRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTAL 183 HSP 2 Score: 80.1073 bits (196), Expect = 1.561e-14 Identity = 46/171 (26.90%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 294 ILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +LK C K +H+ V+K GF + ++L++ + S G ++ A +F +I + + +L G+ + EA+ L+ +M E GV+PD + + AC + L G I ++ ++ + + FV+ +L+N+Y KC K+E A ++F M +K + +W +I Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGS--GRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMI 285
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP260_ARATH (Pentatricopeptide repeat-containing protein At3g28660 OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16 Identity = 52/158 (32.91%), Postives = 86/158 (54.43%), Query Frame = 3 Query: 327 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGF-EYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 K++H V+K G F + V + D A +F +I +P ++ L+ G+V+ E L ++ EM RG+EPD F+ ACA++ AL +G IH V K + E D+FV +L++MY KC +E A +F+++ +++V SW A+I Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFD-ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALI 292
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16 Identity = 53/182 (29.12%), Postives = 98/182 (53.85%), Query Frame = 3 Query: 264 LRLKEQECLTILKTCKNLEEFK---KVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPG-AFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +RL E +++K C NL+E + ++H V+K+GF ++ + L+ A S +M A +F++I G + ++I GF+++ EEA+ L++EM +GV P+ FT+ + A + ++H V K +E V +L++ Y K KVE A+ +F +D K + +W A++ Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV--AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466 HSP 2 Score: 82.8037 bits (203), Expect = 2.408e-15 Identity = 45/160 (28.12%), Postives = 85/160 (53.12%), Query Frame = 3 Query: 330 KVHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQA-LKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +VHA V+K + S+ V T L + G ++ A +F ID+ +++++ G+ + + E A+ ++ E+ + G++P+ FTF ++ CA A + +G Q HG K + L V ++L+ MY K +E A +FK+ +K + SW ++I Sbjct: 414 EVHAQVVKTNYE-----RSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568 HSP 3 Score: 78.1814 bits (191), Expect = 5.931e-14 Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 3 Query: 327 KKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +++H +K+GF + ++LV T + +F ++ E + +LI G+ ++ +E L L+ M G +P+ FTF A A+ G+Q+H V K G + + V NSLIN+Y KC V A +F + + KSV +W ++I Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKG--SNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16 Identity = 43/150 (28.67%), Postives = 77/150 (51.33%), Query Frame = 3 Query: 348 LKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L+ F WN + A S G MD C F Q+ + + + ++I G+ ++ +A+ + +M + G+EP FT + + A + ++ G ++H + KLG ++ V NSL+NMY KC A +F +M + ++SW A+I Sbjct: 77 LRTAFSWNTVLS-------AYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMI 219 HSP 2 Score: 78.9518 bits (193), Expect = 3.477e-14 Identity = 56/184 (30.43%), Postives = 85/184 (46.20%), Query Frame = 3 Query: 315 LEEFKKVHAHVLKWGFFWNPFCAS---NLVATCA----------------LSHW----------GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGV-EPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSV 776 +E KKVH+ ++K G N ++ N+ A C +S W G MD A + F Q+ E +NS+I GF + AL ++++M + PD FT ++ ACA L+ L G QIH H+ GF+ V N+LI+MY +C VE A + +Q K + Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345 HSP 3 Score: 71.633 bits (174), Expect = 5.551e-12 Identity = 51/204 (25.00%), Postives = 89/204 (43.63%), Query Frame = 3 Query: 291 TILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVA----------------------------TCALSHW---GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMD-QKSVASWRAII 797 ++L C NLE+ K++H+H++ GF + + L++ T L + G M+ A +IF + + + ++I G+ + + EA+ L+ M G P+ +T A+ + L +L G QIHG K G Y + V N+LI MY K + AS F + ++ SW ++I Sbjct: 284 SVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP202_ARATH (Pentatricopeptide repeat-containing protein At2g45350, chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.715e-16 Identity = 55/179 (30.73%), Postives = 93/179 (51.96%), Query Frame = 3 Query: 294 ILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSM-DYA---------CSI-FRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +L +CK ++ ++H ++K G N + +V A S + D+A CS F ++++P F +N++I+ +AL L M E GV D F+ + KAC++L +K GMQIHG + K G DLF+QN LI +Y KC + + +F +M ++ S+ ++I Sbjct: 18 VLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 194
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP253_ARATH (Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.852e-16 Identity = 49/176 (27.84%), Postives = 92/176 (52.27%), Query Frame = 3 Query: 285 CLTILKTCKNLEEFKK----VHAHVLKWGFFWNPFCAS-NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 C +K +++ + K+ +HA V+ G N S +L+A+C G + YA +F ++ + G +NS+I + + +E L LY++M ++PD TF KAC L++G + G++ D+FV +S++N+Y KC K++ A +F +M ++ V W ++ Sbjct: 16 CPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCG--RIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMV 189 HSP 2 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 48/173 (27.75%), Postives = 84/173 (48.55%), Query Frame = 3 Query: 297 LKTCKN---LEEFKKVHAHVLKWGFFWNPFCAS---NLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +K C + LE+ + V + +G+ + F S NL C G MD A +F ++ + + +++ GF + K +A+ Y EM G D L +A L K G +HG++++ G ++ V+ SL++MY K +E AS +F +M K+ SW ++I Sbjct: 123 IKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKC-----GKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLI 290
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.852e-16 Identity = 55/173 (31.79%), Postives = 82/173 (47.40%), Query Frame = 3 Query: 297 LKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLVATCALSHW---GSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 LK C L++ KK+H ++K F N+V T L + G + A +F I + S+I G+VK+ EE L L+N M E V + +T+ L AC KL AL +G HG + K G E + SL++MY KC + A +F + + W A+I Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSF------DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315 HSP 2 Score: 82.8037 bits (203), Expect = 2.408e-15 Identity = 59/179 (32.96%), Postives = 89/179 (49.72%), Query Frame = 3 Query: 285 CLTI---LKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGF--EYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 C+TI L C +NLE + VH +K G W+ A+ LV A + A +F E +NS+I GF ++ EALFL++ M V P+ T +LF ACA L +L G +H + KLGF + V +L++ Y KC + A IF +++K+ +W A+I Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRD--AKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518 HSP 3 Score: 75.485 bits (184), Expect = 3.845e-13 Identity = 45/171 (26.32%), Postives = 83/171 (48.54%), Query Frame = 3 Query: 285 CLTILKTCKNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 C +L C N++ ++ H + G + A+ LV+ +G A +F QI EP + + ++R + + + E + LY+ + + G D F KAC +LQ L G +IH + K+ +D V L++MY KC +++ A +F + ++V W ++I Sbjct: 47 CFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGF--FGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMI 214
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP378_ARATH (Pentatricopeptide repeat-containing protein At5g13270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.337e-16 Identity = 55/172 (31.98%), Postives = 87/172 (50.58%), Query Frame = 3 Query: 291 TILKTCKN---LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 T+LK+ N L+ +++HAHV++ G N + +V W + A +F Q+ L+ G+ + + +AL L+ ++ GVE D F F + KACA L+ L G QIH V KLG E ++ V L++ Y KC E A F+++ + + SW AII Sbjct: 189 TLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW--LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 358 HSP 2 Score: 82.8037 bits (203), Expect = 2.408e-15 Identity = 51/175 (29.14%), Postives = 89/175 (50.86%), Query Frame = 3 Query: 294 ILKTCKNLEEF---KKVHAHVLKWGFFWNPFCASNLV---ATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEP-DHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 +LK C +LEE K++HA V K G + LV C+ S + AC F++I EP ++++I G+ + +FEEA+ + + + + FT+ ++F+AC+ L G Q+H K + +++LI MY KC ++ A+ +F+ MD + +W A I Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS-----SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFI 460
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.337e-16 Identity = 47/163 (28.83%), Postives = 83/163 (50.92%), Query Frame = 3 Query: 315 LEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYAC-SIFRQI-DEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 L + ++H++++KWGF + ++L+ S Y C ++F + + +N+++ ++ + E L L+ M EPDH T L + C ++ +LK G Q+H + K G + F++N LI+MY KC + A IF MD + V SW +I Sbjct: 387 LSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFC---SDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLI 546 HSP 2 Score: 82.0333 bits (201), Expect = 4.108e-15 Identity = 48/182 (26.37%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 261 NLRLKEQECLTILKTC---KNLEEFKKVHAHVLKWGFFWNPFCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 + +++ + ++++ C ++L + +K+H H+L ++ +++++ GS+ A +F + E + S+I G+ ++ + EA+ LY +M + + PD F F ++ KACA + G Q+H V KL L QN+LI MY + ++ AS +F + K + SW +II Sbjct: 62 SFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSM--YGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSII 241 HSP 3 Score: 76.2554 bits (186), Expect = 2.254e-13 Identity = 46/144 (31.94%), Postives = 73/144 (50.69%), Query Frame = 3 Query: 381 ASNLVATCAL----SHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQM-DQKSVASWRAII 797 A N +A C+L + G ++ A +F QI+ P +N +I G + +EA+ ++++M G PD + +L A K AL +GMQIH ++ K GF DL V NSL+ MY C + +F+ + SW I+ Sbjct: 302 AGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTIL 445
BLAST of CF838549 vs. ExPASy Swiss-Prot
Match: PPR52_ARATH (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.081e-15 Identity = 48/179 (26.82%), Postives = 92/179 (51.40%), Query Frame = 3 Query: 267 RLKEQECLTILKTCKNLEEFKKVHAHVLKWGFFWNP--FCASNLVATCALSHWGSMDYACSIFRQIDEPGAFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 ++K L +L++C + ++G F P F + L++ A G + A +F + E F ++++I + ++ ++ E L+ M + GV PD F FP + + CA ++ G IH V KLG L V NS++ +Y KC +++FA+ F++M ++ V +W +++ Sbjct: 78 KVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKC--GCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVL 254 HSP 2 Score: 78.9518 bits (193), Expect = 3.477e-14 Identity = 40/130 (30.77%), Postives = 72/130 (55.38%), Query Frame = 3 Query: 420 GSMDYACSIFRQIDEPG----AFDFNSLIRGFVKDVKFEEALFLYNEMFERGVEPDHFTFPALFKACAKLQALKEGMQIHGHVFKLGFEYDLFVQNSLINMYGKCEKVEFASAIFKQMDQKSVASWRAII 797 G D A + ++++ G F + ++I G + + +AL ++ +MF GV P+ T + AC+ L+ + +G ++H K+GF D+ V NSL++MY KC K+E A +F + K V +W ++I Sbjct: 296 GKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMI 425 The following BLAST results are available for this feature:
BLAST of CF838549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 184
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838549 ID=CF838549; Name=CF838549; organism=Citrus sinensis; type=EST; length=797bpback to top |