CF838555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_GLOVI (30S ribosomal protein S9 OS=Gloeobacter violaceus GN=rpsI PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.605e-32 Identity = 73/129 (56.59%), Postives = 89/129 (68.99%), Query Frame = 1 Query: 325 AQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 A +GTGRRKCAIARV L G+G+ +IN R EYL + K PL TLG E Y++ V A GGG++GQA AI LG+ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 5 AAVYWGTGRRKCAIARVRLVPGSGELVINGRPGDEYLHFRQPLMSLAKAPLETLGLENQYNIIVNASGGGVAGQAGAIRLGIARALCELSPDNRRPLKVEGYLSRDPRAKERRKYGLKKARKAPQFSKR 133
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_PROMS (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain AS9601) GN=rpsI PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.096e-32 Identity = 74/125 (59.20%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 337 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 +GTGRRK ++ARV L G G IN R +YL NPL L IK PL TLG E SYD+ V GGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 12 WGTGRRKTSVARVRLIPGNGLIKINGRSGDDYLNFNPLHLNSIKAPLQTLGLENSYDILVNVFGGGLTGQADAIKQGAARALCELSPDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 136
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_PROM5 (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9515) GN=rpsI PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.096e-32 Identity = 73/125 (58.40%), Postives = 86/125 (68.80%), Query Frame = 1 Query: 337 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 +GTGRRK ++ARV L G G+ IN R +YL NP L +K PL TLG E SYD+FV GGGL+GQA AI G ARAL +S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 12 WGTGRRKTSVARVRLIPGNGQIKINGRSGDDYLNFNPSHLNSVKAPLQTLGLENSYDIFVNVFGGGLTGQADAIKQGAARALCDLSPDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 136
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_PROMM (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9313) GN=rpsI PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.737e-32 Identity = 72/125 (57.60%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 337 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 +GTGRRK ++ARV L G+G IN R YL NP +L +K PL TLG YDV V HGGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 11 WGTGRRKTSVARVRLVPGSGTITINGRPGDHYLNFNPAYLAAVKAPLQTLGLNEQYDVLVNVHGGGLTGQADAIKQGAARALCELSADNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 135
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_PROM0 (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9301) GN=rpsI PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.737e-32 Identity = 74/125 (59.20%), Postives = 87/125 (69.60%), Query Frame = 1 Query: 337 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 +GTGRRK ++ARV L G G IN R +YL NPL L IK PL TLG E SYD++V GGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 12 WGTGRRKTSVARVRLIPGNGLIKINGRAGDDYLNFNPLHLNSIKAPLQTLGLENSYDMYVNVFGGGLTGQADAIKQGAARALCELSPDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 136
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_ACAM1 (30S ribosomal protein S9 OS=Acaryochloris marina (strain MBIC 11017) GN=rpsI PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.737e-32 Identity = 74/124 (59.68%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 340 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 GTGRRK +I RV L G+G IN + YLQ NP ++ K PL +LG E YDV V A GGGL+GQA AI LGVARAL ++ ++R PLK EG LTRD R ERKK GL KARKAPQYSKR Sbjct: 14 GTGRRKSSIVRVRLVPGSGVMTINGKPGDLYLQFNPSYIANAKAPLESLGLENDYDVLVNARGGGLTGQADAIKLGVARALCELDPENRKPLKLEGYLTRDPRAKERKKYGLRKARKAPQYSKR 137
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_PROMA (30S ribosomal protein S9 OS=Prochlorococcus marinus GN=rpsI PE=3 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.575e-32 Identity = 73/129 (56.59%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 325 AQTIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 A +GTGRRK ++ARV L GTGK IN R YL NP +L +K PL TLG +YDV V +GGGL+GQ+ AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 8 AVVYWGTGRRKTSVARVRLIPGTGKITINGRPGDHYLNFNPAYLSAVKAPLHTLGLGEAYDVLVNVYGGGLTGQSDAIKQGAARALCELSVDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 136
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_SYNS9 (30S ribosomal protein S9 OS=Synechococcus sp. (strain CC9902) GN=rpsI PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.669e-32 Identity = 71/125 (56.80%), Postives = 85/125 (68.00%), Query Frame = 1 Query: 337 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 +GTGRRK ++ARV L G G IN R YL NP ++ +K PL TLG T YDV V HGGGL+GQ+ AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 9 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPAYIAAVKAPLETLGLSTEYDVLVNVHGGGLTGQSGAIKQGAARALCELSADNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 133
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_SYNS3 (30S ribosomal protein S9 OS=Synechococcus sp. (strain CC9311) GN=rpsI PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.963e-32 Identity = 72/125 (57.60%), Postives = 84/125 (67.20%), Query Frame = 1 Query: 337 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 +GTGRRK ++ARV L G G IN R YL NP +L +K PL TLG T YDV V GGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 11 WGTGRRKTSVARVRLVPGNGTITINGRPGDNYLNYNPAYLAAVKAPLQTLGLSTEYDVLVNVRGGGLTGQADAIKQGAARALCELSVDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 135
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_THEFY (30S ribosomal protein S9 OS=Thermobifida fusca (strain YX) GN=rpsI PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.040e-31 Identity = 75/125 (60.00%), Postives = 91/125 (72.80%), Query Frame = 1 Query: 340 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDH-RSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 GTGRRK A+ARV + GTG++ IN + +EY N + Q IK PL TLG+E +YDVF + +GGG SGQA A+ G+ARAL + +H R PLKK G LTRD+R VERKKAGL KARKAPQYSKR Sbjct: 46 GTGRRKTAVARVRVVPGTGEWKINGKSLEEYFP-NKVHQQLIKEPLATLGFEGAYDVFARLNGGGTSGQAGALRHGLARALAAMDPEHNRPPLKKAGFLTRDARKVERKKAGLKKARKAPQYSKR 169 The following BLAST results are available for this feature:
BLAST of CF838555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838555 ID=CF838555; Name=CF838555; organism=Citrus sinensis; type=EST; length=781bpback to top |