CF838555
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_STRPC (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=rpsI PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28 Identity = 71/124 (57.26%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 340 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P E SYDVFV GGG GQ+ AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q+SKR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_STRPB (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=rpsI PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28 Identity = 71/124 (57.26%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 340 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P E SYDVFV GGG GQ+ AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q+SKR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_STRP8 (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M18 GN=rpsI PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28 Identity = 71/124 (57.26%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 340 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P E SYDVFV GGG GQ+ AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q+SKR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_STRP6 (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M6 GN=rpsI PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28 Identity = 71/124 (57.26%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 340 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P E SYDVFV GGG GQ+ AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q+SKR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_STRP3 (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M3 GN=rpsI PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28 Identity = 71/124 (57.26%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 340 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P E SYDVFV GGG GQ+ AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q+SKR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_STRP1 (30S ribosomal protein S9 OS=Streptococcus pyogenes serotype M1 GN=rpsI PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.076e-28 Identity = 71/124 (57.26%), Postives = 83/124 (66.94%), Query Frame = 1 Query: 340 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P E SYDVFV GGG GQ+ AI G+ARALL+V D R LK+ GLLTRD+R+VERKK GL KARKA Q+SKR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-IINQPFAVTSTEGSYDVFVNVVGGGYGGQSGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_ONYPE (30S ribosomal protein S9 OS=Onion yellows phytoplasma GN=rpsI PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.406e-28 Identity = 71/125 (56.80%), Postives = 88/125 (70.40%), Query Frame = 1 Query: 337 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 FGTGRRK A+ARV+L GTGK IN RD ++YL L+ I+ PL ++DV V +GGGLS QA AI LG+ARAL++ + R+ LKK GLLTRD+R VERKK GL KAR+APQ+SKR Sbjct: 7 FGTGRRKSAVARVILTNGTGKITINTRDFEKYLPLPATRLEMIQ-PLELTEKREAFDVSVNVNGGGLSAQAGAIRLGIARALIESVPELRAILKKAGLLTRDARCVERKKYGLKKARRAPQFSKR 130
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_GEOKA (30S ribosomal protein S9 OS=Geobacillus kaustophilus GN=rpsI PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.406e-28 Identity = 68/125 (54.40%), Postives = 87/125 (69.60%), Query Frame = 1 Query: 337 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 +GTGRRK ++ARV L G G+ I+N RD +EY+ L ++ +K PLV SYDV V GGG +GQA AI G+ARALL+V + R+ LK+ GLLTRD+RV ERKK GL AR+APQ+SKR Sbjct: 7 YGTGRRKSSVARVRLVPGDGRIIVNKRDIREYIPTEAL-IEMVKQPLVLTETLGSYDVLVNVQGGGFAGQAGAIRHGIARALLEVDPEFRTVLKRAGLLTRDARVKERKKYGLKGARRAPQFSKR 130
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RR9_PHATR (30S ribosomal protein S9, chloroplastic OS=Phaeodactylum tricornutum GN=rps9 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.406e-28 Identity = 69/124 (55.65%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 340 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 G G+RK +IARV L G GK IIN +YLQ N +L + PL L E +D+ GGGL+GQAQAI LGVAR L + +++RS LK G LTRDSR+ ERKK GL KARKAPQYSKR Sbjct: 15 GLGKRKQSIARVFLLPGDGKIIINKTSGNKYLQYNDNYLNTVWSPLEKLNLEKQFDIVALVQGGGLTGQAQAIQLGVARLLCTMDKENRSILKPFGFLTRDSRIKERKKYGLRKARKAPQYSKR 138
BLAST of CF838555 vs. ExPASy Swiss-Prot
Match: RS9_STRSV (30S ribosomal protein S9 OS=Streptococcus sanguinis (strain SK36) GN=rpsI PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.836e-28 Identity = 72/124 (58.06%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 340 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 711 GTGRRK A+ARV L GTGK +N +D +EY+ L L I P SYDVFV GGG +GQA AI G+ARALL+V D R LK+ GLLTRDSR VERKK GL KARKA Q+SKR Sbjct: 8 GTGRRKNAVARVRLVPGTGKITVNKKDVEEYIPHADLRL-VINQPFAVTSTAGSYDVFVNVVGGGYAGQAGAIRHGIARALLQVDPDFRDSLKRAGLLTRDSRKVERKKPGLKKARKASQFSKR 130 The following BLAST results are available for this feature:
BLAST of CF838555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838555 ID=CF838555; Name=CF838555; organism=Citrus sinensis; type=EST; length=781bpback to top |