CF838561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL1A_ARATH (RING-H2 finger protein ATL1A OS=Arabidopsis thaliana GN=ATL1A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.065e-17 Identity = 41/107 (38.32%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 89 SSGANTMNTAPPH-AHQALDLSILKRIPAF------VYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLV 388 SS N + PH ++ LD S ++ IP F V + + K +C+VCL+EF+++E R++P C HVFH+DCID+W Q ++NCPLCR V + + L+ Sbjct: 84 SSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLI 190
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL5G_ARATH (Probable RING-H2 finger protein ATL5G OS=Arabidopsis thaliana GN=ATL5G PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17 Identity = 47/106 (44.34%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 140 LDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIEPTERDLGVVHQMG 457 L+ S++K I + Y + + DC+VCLSEFE+NE+ R+LPKC H FH+ CID W +SHSNCPLCRA V + +P V + VSV+ + + HQ G Sbjct: 117 LNESMIKSITVYKYKSG-DGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV---TGVNNPTASVGQNVSVVVANQSN--SAHQTG 216
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL5K_ARATH (RING-H2 finger protein ATL5K OS=Arabidopsis thaliana GN=ATL5K PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17 Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 2 Query: 116 APPHAHQALDLSILKRIPAFVYSPNI-------------EDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLD 364 +P + LD S+++ IP F + E+ K +C+VCLSEF+D E R++P C H+FH+DCID+W Q+++NCPLCR V D Sbjct: 91 SPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCD 186
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL4J_ARATH (RING-H2 finger protein ATL4J OS=Arabidopsis thaliana GN=ATL4J PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 110 NTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLD 364 +TA LD + ++ +P F +S ++ K+ LDC+VCLS+FE E R+LPKCRH FH+ CID W + H+ CPLCR V ++ Sbjct: 88 STASSDRFSGLDKTAIESLPLFRFSA-LKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSME 171
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL2C_ARATH (Putative RING-H2 finger protein ATL2C OS=Arabidopsis thaliana GN=ATL2C PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16 Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 140 LDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIEPTERDL 436 +D S++ +P F Y + P DC VCL EFE + R+LPKC H FHV+CID W SHS CPLCR+ + + H L +V E + RD+ Sbjct: 100 VDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSSRDM 198
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL3B_ARATH (RING-H2 finger protein ATL3B OS=Arabidopsis thaliana GN=ATL3B PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.925e-16 Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 128 AHQALDLSILKRIPAFVYSPNIEDP--KEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRA 349 A + LD+S+++ P F+YS K L+CA+CL+EFED+E R+LPKC HVFH CID W ++H CP+CRA Sbjct: 96 AARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRA 171
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL2G_ARATH (RING-H2 finger protein ATL2G OS=Arabidopsis thaliana GN=ATL2G PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 134 QALDLSILKRIPAFVYSP--NIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLD 364 + LD ++ P F+YS + K ++CAVCL EFED+E R++P C HVFH DC+D+W HS CPLCRA + L+ Sbjct: 105 RGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADLVLN 183
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL4C_ARATH (Putative RING-H2 finger protein ATL4C OS=Arabidopsis thaliana GN=ATL4C PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.288e-16 Identity = 42/118 (35.59%), Postives = 65/118 (55.08%), Query Frame = 2 Query: 95 GANTMNTAPPHAHQALDLSILKRIPAFVYSP--NIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEEVVSVIE--PTERDL 436 GA + A + L+ +++ P F+YS ++ K ++CA+CLSEFED E R +P C H FH +CID+W S S CP+CRA + L +P + ++ ++ P ER L Sbjct: 80 GAAGQDVLHSRARRGLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESYPYLNMDVETGGVQKLPNERSL 197
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL1C_ARATH (RING-H2 finger protein ATL1C OS=Arabidopsis thaliana GN=ATL1C PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16 Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 101 NTMNTAPPHAHQALDLSILKRIPAFVYSP--NIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRA 349 N T P LD S+++ P F YS + KE L+C VCL+EFED+E R++P+C HVFH CID W +S + CPLCRA Sbjct: 81 NVRQTTEP----GLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCRA 161
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL2D_ARATH (Putative RING-H2 finger protein ATL2D OS=Arabidopsis thaliana GN=ATL2D PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.552e-16 Identity = 36/75 (48.00%), Postives = 52/75 (69.33%), Query Frame = 2 Query: 140 LDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLD 364 LD ++ +P F +S ++ K+ L+C+VCLS+FED E R+LPKCRH FH+ CID W + H+ CPLCR V ++ Sbjct: 99 LDKKAIESLPFFRFSA-LKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIE 172 The following BLAST results are available for this feature:
BLAST of CF838561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838561 ID=CF838561; Name=CF838561; organism=Citrus sinensis; type=EST; length=739bpback to top |