CF838561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL4A_ARATH (RING-H2 finger protein ATL4A OS=Arabidopsis thaliana GN=ATL4A PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.248e-15 Identity = 37/82 (45.12%), Postives = 51/82 (62.20%), Query Frame = 2 Query: 116 APPHAHQALDLSILKRIPAFVYSP--NIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPV 355 +P + LD +K P+FVY+ IE L+C VCL+EF+D+E R++P C HVFH DC+D+W S CP+CRA V Sbjct: 49 SPRRPPRGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRAKV 130
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL3E_ARATH (Putative RING-H2 finger protein ATL3E OS=Arabidopsis thaliana GN=ATL3E PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.248e-15 Identity = 50/138 (36.23%), Postives = 67/138 (48.55%), Query Frame = 2 Query: 152 ILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLV------------QVEE--VVSVIEPTERDLGVVHQMGCXXXXXXXXXLPQLESVSVEIP 523 +L+ IP + N +D K L+C VCLSE D + RVLP C H FHV+CID W QS+S CP+CR V L + P + Q E S PT D ++ GC P+L +V ++IP Sbjct: 68 VLRSIPIVDF--NTKDFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSRTRPELGGRDKSFNQNHDQTSEHHEFSTDPPTNTDTAIIEDGGCGEANEGQ---PELTAVVIDIP 200
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL1B_ARATH (RING-H2 finger protein ATL1B OS=Arabidopsis thaliana GN=ATL1B PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.248e-15 Identity = 37/87 (42.53%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 92 SGANTMNTAPP--HAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCR 346 SG+ T + PP A++ L +L+ +P +SP + ++ +CA+CL+EF + RVLP+C H FHV CID W SHS+CP CR Sbjct: 67 SGSQTQSPQPPVAAANKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCR 153
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL5C_ARATH (RING-H2 finger protein ATL5C OS=Arabidopsis thaliana GN=ATL5C PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15 Identity = 37/83 (44.58%), Postives = 54/83 (65.06%), Query Frame = 2 Query: 131 HQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQ-LDITLV 376 + +D S+++ +P F + + K+ L+CAVCL+ FE E R+LPKC+H FHV+C+D W +HS CPLCR V DI L+ Sbjct: 118 NSGIDRSVIESLPVFRFGA-LSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDILLI 199
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL4O_ARATH (RING-H2 finger protein ATL4O OS=Arabidopsis thaliana GN=ATL4O PE=2 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.629e-15 Identity = 34/73 (46.58%), Postives = 53/73 (72.60%), Query Frame = 2 Query: 140 LDLSILKRIPAFVYSPNIEDPK---EPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRA 349 LD ++++ P F YS ++++ K + L+CA+CL+E ED+E R+LP C H+FH+DCID W SH+ CP+CR+ Sbjct: 95 LDNAVVESFPVFAYS-SVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRS 166
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: EL5_ORYSJ (E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica GN=EL5.1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15 Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 2 Query: 140 LDLSILKRIPAFVYSPNI---------EDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPV 355 +D +L+ +P VYS + E+ + ++CAVCL+E ED E R LP+C H FH +C+DMW SHS CPLCR V Sbjct: 99 VDPEVLRSLPVTVYSRSTAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 179
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL5F_ARATH (RING-H2 finger protein ATL5F OS=Arabidopsis thaliana GN=ATL5F PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15 Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 2 Query: 215 DCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQL 361 +C+VCL+EFE++E+ R+LPKC H FH++CID W SH NCPLCRAPV L Sbjct: 134 ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLL 182
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL4I_ARATH (Putative RING-H2 finger protein ATL4I OS=Arabidopsis thaliana GN=ATL4I PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15 Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 2 Query: 86 LSSGANTMNTAP------PHAHQALDLSILKRIPAFVYSP--NIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDITLVHPLVQVEE-VVSVIEPTERD 433 L G +T++ P P + L+L I+ P F YS ++ + K L+CA+CL EF+ + R+L C HVFH +CID+WF+SH CP+CR + + V+E ++ VI+ T D Sbjct: 58 LHHGGDTVSDNPLQQPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDLDPPPPPENTKPTVDEMIIDVIQETSDD 182
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL1R_ARATH (RING-H2 finger protein ATL1R OS=Arabidopsis thaliana GN=ATL1R PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.741e-15 Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 2 Query: 86 LSSGANTMNTAPPH---AHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCR 346 ++S + T PP A++ L +L+ +P YSP+ ++ ++CA+CL+EF + RVLP+C H FHV CID W SHS+CP CR Sbjct: 57 IASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL1O_ARATH (RING-H2 finger protein ATL1O OS=Arabidopsis thaliana GN=ATL1O PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 6.192e-15 Identity = 31/52 (59.62%), Postives = 40/52 (76.92%), Query Frame = 2 Query: 206 EPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQL 361 E DC VCL+EFE++E+ R+LPKC H FH+ CID W SH+NCPLCRA + + Sbjct: 173 ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAM 224 The following BLAST results are available for this feature:
BLAST of CF838561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838561 ID=CF838561; Name=CF838561; organism=Citrus sinensis; type=EST; length=739bpback to top |