CF838561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL4H_ARATH (Putative RING-H2 finger protein ATL4H OS=Arabidopsis thaliana GN=ATL4H PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 2 Query: 140 LDLSILKRIPAFVYSPNIEDPK-EPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLDIT 370 LD +++K+I F + K DC++CL EF ++E+ R+LPKC H FHV CID W +SHSNCPLCRA + + T Sbjct: 154 LDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTT 231
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL1P_ARATH (RING-H2 finger protein ATL1P OS=Arabidopsis thaliana GN=ATL1P PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.056e-14 Identity = 31/51 (60.78%), Postives = 39/51 (76.47%), Query Frame = 2 Query: 203 KEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPV 355 K+ L+C++CLSE + R+LPKC H FHV+CIDMWFQSHS CP+CR V Sbjct: 122 KDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL5H_ARATH (RING-H2 finger protein ATL5H OS=Arabidopsis thaliana GN=ATL5H PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.379e-14 Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 2 Query: 134 QALDLSILKRIPAFVYSP--NIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCR 346 + LD ++ P FVYS + K L+CA+CL+EFED+E R+LPKC HVFH CI W Q H CP+CR Sbjct: 94 RGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCR 166
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL3I_ARATH (RING-H2 finger protein ATL3I OS=Arabidopsis thaliana GN=ATL3I PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.379e-14 Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 2 Query: 140 LDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCR 346 LD + + +P F+Y ++P DCAVCL+EF D + R+LP C H FH+ CID W S+S CPLCR Sbjct: 181 LDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCR 249
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL2F_ARATH (RING-H2 finger protein ATL2F OS=Arabidopsis thaliana GN=ATL2F PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14 Identity = 37/84 (44.05%), Postives = 52/84 (61.90%), Query Frame = 2 Query: 128 AHQALDLSILKRIPAFVYSPNIEDPKEP------LDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQL 361 A + LD +I+ P F+YS + KE ++CAVC+ EFED+E R++P+C HVFH DC+ +W HS CPLCR + L Sbjct: 64 AVRGLDEAIINSFPTFLYS----EVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDLCL 143
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL1K_ARATH (RING-H2 finger protein ATL1K OS=Arabidopsis thaliana GN=ATL1K PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14 Identity = 42/138 (30.43%), Postives = 61/138 (44.20%), Query Frame = 2 Query: 80 FFLSSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCR----------------------APVQLDITLVHPLVQVEEVVSVIEPTE 427 F +S ++++ +++ + L+ P YSP + P +C +CLS+F E R+LPKC H FHV CID W Q H CP CR P ++ I + PL E V+ I P E Sbjct: 89 FMISEPVPSLSSTRGSSNKGIKKKALRMFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLVETCQKILGDFSQADSVTAEPTEIVIVTIVPLEPTEIVIVTIAPLE 226
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL3G_ARATH (RING-H2 finger protein ATL3G OS=Arabidopsis thaliana GN=ATL3G PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14 Identity = 37/81 (45.68%), Postives = 48/81 (59.26%), Query Frame = 2 Query: 140 LDLSILKRIPAFVYSPNIEDPKEPL---------DCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPV 355 LD S++K +P F+YS K + DCAVCL EFE+ + R LP C H FH++CID W +SH NCPLCR + Sbjct: 121 LDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAI 201
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL3C_ARATH (RING-H2 finger protein ATL3C OS=Arabidopsis thaliana GN=ATL3C PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14 Identity = 42/92 (45.65%), Postives = 51/92 (55.43%), Query Frame = 2 Query: 89 SSGANTMNTAPPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRAPVQLD 364 +S AN N A L LK+IP +Y I D K +C +CL +FED E RVLPKC H FHV CID W S S+CP CR + L+ Sbjct: 73 ASNANA-NLGRLAAATGLKKQALKQIPVGLYGSGIIDMKAT-ECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLE 162
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL2E_ARATH (RING-H2 finger protein ATL2E OS=Arabidopsis thaliana GN=ATL2E PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.242e-14 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 119 PPHAHQALDLSILKRIPAFVYSPNIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRA 349 P + LD ++ +P + Y+ + E DC +CLS+FE+ E +V+P C HVFHVDC+D W S+ CPLCR+ Sbjct: 109 PYSFRRGLDSQAVRSLPVYRYTKAAKQRNE--DCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRS 183
BLAST of CF838561 vs. ExPASy Swiss-Prot
Match: ATL1H_ARATH (RING-H2 finger protein ATL1H OS=Arabidopsis thaliana GN=ATL1H PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.242e-14 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 134 QALDLSILKRIPAFVYSP--NIEDPKEPLDCAVCLSEFEDNENGRVLPKCRHVFHVDCIDMWFQSHSNCPLCRA 349 + L ++ P+F+YS ++ K ++CA+CL+EFED E R++P C H FH CID+W S S CP+CRA Sbjct: 98 RGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRA 171 The following BLAST results are available for this feature:
BLAST of CF838561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838561 ID=CF838561; Name=CF838561; organism=Citrus sinensis; type=EST; length=739bpback to top |