CF838602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H3_CANGA (Histone H3 OS=Candida glabrata GN=HHT1 PE=3 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 1.273e-52 Identity = 106/136 (77.94%), Postives = 114/136 (83.82%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR++ KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNL AIHAKRVTI KDI+LARR+RGER+ Sbjct: 1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H3_ASHGO (Histone H3 OS=Ashbya gossypii GN=HHT1 PE=3 SV=3) HSP 1 Score: 206.068 bits (523), Expect = 1.273e-52 Identity = 106/136 (77.94%), Postives = 114/136 (83.82%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLA+KAARKSAP+TGGVKKPHRY+PGTVALREIR++ KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNL AIHAKRVTI KDI+LARR+RGER+ Sbjct: 1 MARTKQTARKSTGGKAPRKQLASKAARKSAPSTGGVKKPHRYKPGTVALREIRRFQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H3L_HUMAN (Histone H3-like OS=Homo sapiens PE=1 SV=3) HSP 1 Score: 206.068 bits (523), Expect = 1.273e-52 Identity = 110/136 (80.88%), Postives = 112/136 (82.35%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKS P+T GVK PHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDF TDLRFQS EDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSTPSTCGVK-PHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H33L2_CAEEL (Histone H3.3-like type 2 OS=Caenorhabditis elegans GN=his-74 PE=2 SV=3) HSP 1 Score: 204.912 bits (520), Expect = 2.837e-52 Identity = 107/136 (78.68%), Postives = 112/136 (82.35%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRK LATKAARKSA TG VKK HR+RPGTVALREIR+Y KSTELL+RKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTELLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H3L2_ARATH (Histone H3-like 2 OS=Arabidopsis thaliana GN=MGH3 PE=2 SV=3) HSP 1 Score: 201.06 bits (510), Expect = 4.096e-51 Identity = 106/137 (77.37%), Postives = 111/137 (81.02%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSA-PTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGK PRK+LATKAARK+ P GGVK+ HR+RPGTVALREIRKY KST+LLIRKLPFQRLVREIAQDFK DLRFQSH FEDTNLCAIHAKRVTIM KDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMSKDIQLARRIRGERA 137
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H31_TETTH (Histone H3 OS=Tetrahymena thermophila GN=HHT1 PE=1 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 4.096e-51 Identity = 102/135 (75.56%), Postives = 111/135 (82.22%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 466 MARTKQTARKS G KAPRKQLA+KAARKSAP TGG+KKPHR+RPGTVALREIRKY KST+LLIRKLPFQRLVR+IA +FK +LRFQS FEDTNLCAIHA+RVTIM KD+QLARRIRGER Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H31_TETPY (Histone H3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 4.096e-51 Identity = 102/135 (75.56%), Postives = 111/135 (82.22%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 466 MARTKQTARKS G KAPRKQLA+KAARKSAP TGG+KKPHR+RPGTVALREIRKY KST+LLIRKLPFQRLVR+IA +FK +LRFQS FEDTNLCAIHA+RVTIM KD+QLARRIRGER Sbjct: 1 MARTKQTARKSTGAKAPRKQLASKAARKSAPATGGIKKPHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVRDIAHEFKAELRFQSSAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H3_EUPCR (Histone H3 OS=Euplotes crassus PE=3 SV=3) HSP 1 Score: 200.675 bits (509), Expect = 5.349e-51 Identity = 102/136 (75.00%), Postives = 111/136 (81.62%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARK+ GGKAPRK + K+ARK+A TT G+KKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQ+FK DLRFQS FEDTNLCAIHAKRVTIMPKD+QLARRIRGER+ Sbjct: 1 MARTKQTARKNVGGKAPRKHIGQKSARKTASTTAGMKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQEFKGDLRFQSSAVLALQEAAEAYLVSLFEDTNLCAIHAKRVTIMPKDMQLARRIRGERS 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H3L_CAIMO (Histone H3-like OS=Cairina moschata PE=3 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 2.655e-50 Identity = 105/136 (77.21%), Postives = 107/136 (78.68%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTA KS G KAPRKQLATKAA KSAP GGVKKPH YRPGTVAL EI +Y KSTELLI KLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRV+IMPKDIQL RRIRGERA Sbjct: 1 MARTKQTACKSTGRKAPRKQLATKAAHKSAPAMGGVKKPHCYRPGTVALHEIHRYQKSTELLICKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVSIMPKDIQLTRRIRGERA 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H33_TETPY (Histone H3.3 OS=Tetrahymena pyriformis PE=1 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 7.725e-50 Identity = 100/135 (74.07%), Postives = 110/135 (81.48%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 466 MARTKQTARKS G KAPRKQLATKAARKSAP +GGVKKPH++RPGTVALREIRKY K+T+LLIRKLPFQRLVR+IA + K D+RFQS FEDTNLCAIHA+RVTIM KD+QLARRIRGER Sbjct: 1 MARTKQTARKSTGVKAPRKQLATKAARKSAPVSGGVKKPHKFRPGTVALREIRKYQKTTDLLIRKLPFQRLVRDIAMEMKNDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTIMTKDMQLARRIRGER 135 The following BLAST results are available for this feature:
BLAST of CF838602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838602 ID=CF838602; Name=CF838602; organism=Citrus sinensis; type=EST; length=638bpback to top |