CF838602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H33_DROME (Histone H3.3 OS=Drosophila melanogaster GN=His3.3A PE=1 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.242e-57 Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H33_DROHY (Histone H3.3 OS=Drosophila hydei GN=His3.3A PE=3 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.242e-57 Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H33_DANRE (Histone H3.3 OS=Danio rerio GN=h3f3a PE=2 SV=3) HSP 1 Score: 221.861 bits (564), Expect = 2.242e-57 Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H33_CHICK (Histone H3.3 OS=Gallus gallus GN=H3-IX PE=2 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.242e-57 Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H33_BOVIN (Histone H3.3 OS=Bos taurus GN=H3F3A PE=1 SV=3) HSP 1 Score: 221.861 bits (564), Expect = 2.242e-57 Identity = 115/136 (84.56%), Postives = 117/136 (86.03%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H32_XENTR (Histone H3.2 OS=Xenopus tropicalis GN=TGas081o10.1 PE=2 SV=3) HSP 1 Score: 221.861 bits (564), Expect = 2.242e-57 Identity = 115/136 (84.56%), Postives = 116/136 (85.29%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H32_XENLA (Histone H3.2 OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.242e-57 Identity = 115/136 (84.56%), Postives = 116/136 (85.29%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H32_PORAF (Histone H3.2 OS=Poroderma africanus PE=1 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.242e-57 Identity = 115/136 (84.56%), Postives = 116/136 (85.29%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H32_ONCMY (Histone H3.2 OS=Oncorhynchus mykiss PE=1 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.242e-57 Identity = 115/136 (84.56%), Postives = 116/136 (85.29%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838602 vs. ExPASy Swiss-Prot
Match: H32_MUSPA (Histone H3.2 OS=Mus pahari GN=H312 PE=2 SV=3) HSP 1 Score: 221.861 bits (564), Expect = 2.242e-57 Identity = 115/136 (84.56%), Postives = 116/136 (85.29%), Query Frame = 2 Query: 62 MARTKQTARKSAGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYHKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHXXXXXXXXXXXXXXXXFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 469 MARTKQTARKS GGKAPRKQLATKAARKSAP TGGVKKPHRYRPGTVALREIR+Y KSTELLIRKLPFQRLVREIAQDFKTDLRFQS FEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136 The following BLAST results are available for this feature:
BLAST of CF838602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838602 ID=CF838602; Name=CF838602; organism=Citrus sinensis; type=EST; length=638bpback to top |