CF838605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: DAT_ACIBA (Diaminobutyrate--2-oxoglutarate aminotransferase OS=Acinetobacter baumannii GN=dat PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 53/162 (32.72%), Postives = 76/162 (46.91%), Query Frame = 1 Query: 346 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIAD-FAEALASKMPGNLK---VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGE 813 PL + + ++ D G +YLD G T+ GH HP V+ SI + + L L + D F EAL + +PG + + F SG +A E AI +A+ YTG + +IS YHG G++ T + K N + GV P YR G GE Sbjct: 36 PLAIAKAQGCWVTDVEGTQYLDCLAGAGTLALGHNHPAVIQSIQDTLASGLPLHTLDLTTPLKDAFTEALLAYLPGGKEEYCLQFCGPSGADATEAAIKLAKTYTGRSSVISFSGGYHGMTHGSLAMTGNLSAKNAVNGLMPGVQFMPYPHEYRCPLGLGGE 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_VIBVY (Acetylornithine aminotransferase OS=Vibrio vulnificus (strain YJ016) GN=argD PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 358 VDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG------CNDIISLRNAYHGNAAGTMGATAQS 726 V G+ ++D+NG Y+D GGIA C GHCHP +V+++ Q ++ H + + N A+ L + VFF NSG EANE A+ +AR Y ++II+ + +HG T+ Q+ Sbjct: 28 VKGQGSRIWDQNGNEYIDFAGGIAVSCLGHCHPVMVNALTEQAGKLWHLSNVMTNEPALRLAKKLTE--VSFAERVFFANSGAEANEAALKLARRYAADVYGPEKSEIIAFKQGFHGRTFFTVTVGGQA 154
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_VIBVU (Acetylornithine aminotransferase OS=Vibrio vulnificus GN=argD PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 1 Query: 358 VDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTG------CNDIISLRNAYHGNAAGTMGATAQS 726 V G+ ++D+NG Y+D GGIA C GHCHP +V+++ Q ++ H + + N A+ L + VFF NSG EANE A+ +AR Y ++II+ + +HG T+ Q+ Sbjct: 28 VKGQGSRIWDQNGNEYIDFAGGIAVSCLGHCHPVMVNALTEQAGKLWHLSNVMTNEPALRLAKKLTE--VSFAERVFFANSGAEANEAALKLARRYAADVYGPEKSEIIAFKQGFHGRTFFTVTVGGQA 154
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SALPC (Putrescine aminotransferase OS=Salmonella paratyphi C (strain RKS4594) GN=patA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14 Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQS 726 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKS 194
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SALCH (Putrescine aminotransferase OS=Salmonella choleraesuis GN=patA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14 Identity = 48/125 (38.40%), Postives = 69/125 (55.20%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQS 726 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKS 194
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ENTS8 (Putrescine aminotransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=patA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14 Identity = 55/154 (35.71%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHAL--NPDPYRGVFG 801 G + L D G+ +LD GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E AI +A+ Y G ++ A+HG + G + ATA++ ++ F + G H N D R + G Sbjct: 71 GGLNTLVDTQGQEFLDCLGGFGIFNVGHRNPVVVSAVENQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAAIKLAKAYQSPRGKFTFVAASGAFHGKSLGALSATAKAAFRKPFMPLLPGFRHVPFGNIDALRELLG 223
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ECOLC (Putrescine aminotransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=patA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14 Identity = 48/128 (37.50%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GGLNTLVDTQGEEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: DAT_HAEIN (Diaminobutyrate--2-oxoglutarate aminotransferase OS=Haemophilus influenzae GN=dat PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14 Identity = 63/193 (32.64%), Postives = 87/193 (45.08%), Query Frame = 1 Query: 289 ILAKRKTFLS-----PSLFHLYSKPLNVVDGKMQ--YLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIAD-FAEALASKMPGNLKVVFFTN-SGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV--VQTGVHHALNPDPYRGVFGADGEMYAKDVQ 834 ILA + FL S Y + L K Q ++ D G YLD G T+ GH HP ++ +I + + L L + D F+E L S P + ++ FT SG +ANE AI +A+ YTG +II+ +HG G + T K V + GV P YR FG GE AK V+ Sbjct: 10 ILASNQHFLDRQDVMESNVRSYPRKLPFAYAKAQGCWVTDVEGNEYLDFLAGAGTLALGHNHPILMQAIKDVLDSGLPLHTLDLTTPLKDAFSEELLSFFPKDKYILQFTGPSGADANEAAIKLAKTYTGRGNIIAFSGGFHGMTQGALALTGNLGAKNAVENLMPGVQFMPYPHEYRCPFGIGGEAGAKAVE 202
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_LACLA (Acetylornithine aminotransferase OS=Lactococcus lactis subsp. lactis GN=argD PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14 Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 322 SLFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ 723 +LF Y + P +++ G+ QYLFD+ G +YLD GI + G+ ++ Q+ + H + LY N D AE L+ + FF NSGTEANE A+ + L I++ + +HG G M AT Q Sbjct: 3 NLFENYGRLPFSLIKGEDQYLFDDRGNKYLDFTSGIGVMNLGYSFEKGKVAVKAQLDSLSHLSNLYQNPLQEDVAEKLSQ---NHSYKAFFCNSGTEANEAALKLTHLIKKDQKILAFTDGFHGRTFGAMSATMQ 134
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ERWCT (Putrescine aminotransferase OS=Erwinia carotovora subsp. atroseptica GN=patA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14 Identity = 47/134 (35.07%), Postives = 70/134 (52.24%), Query Frame = 1 Query: 379 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHH 765 L D G YLD GG GH +P V+ ++ +Q+ R + L+ A+ LA+ PGNLK FF+NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+ ++ F + G HH Sbjct: 76 LIDTQGNEYLDCLGGYGIFNVGHRNPNVIAAVESQLARQPLHSQELLDPLRGLLAKTLAALTPGNLKYSFFSNSGTESVEAALKLAKAYQSPRGKYTFIAATGAFHGKSLGALSATAKPAFRRPFMPLLPGFHH 209 The following BLAST results are available for this feature:
BLAST of CF838605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838605 ID=CF838605; Name=CF838605; organism=Citrus sinensis; type=EST; length=844bpback to top |