CF838605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ASTC_YERE8 (Succinylornithine transaminase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=astC PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14 Identity = 51/156 (32.69%), Postives = 74/156 (47.44%), Query Frame = 1 Query: 355 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------------GCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPD 780 VV G+ L+D+ G+ Y+D GGIA GH HP V +++ Q ++ H Y N + A+ L + VFF NSG EANE A+ +AR Y N I++ RNA+HG T+ A Q + F + G+ H + D Sbjct: 27 VVRGEGATLWDQQGKSYIDFAGGIAVNALGHGHPAVKAALIEQADKVWHLGNGYTNEPVLRLAKQLIDAT--FAEKVFFCNSGAEANEAALKLARKYALDNFANKPGQQGEKNQIVAFRNAFHGRTLFTVSAGGQPKYSQDFAPLPGGISHGIFND 180
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_WOLSU (Acetylornithine aminotransferase OS=Wolinella succinogenes GN=argD PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14 Identity = 57/177 (32.20%), Postives = 85/177 (48.02%), Query Frame = 1 Query: 325 LFHLYSKP-LNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCND-------IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDV 831 + H Y + + GK L+D G+ Y+D GIA GH + + +I +Q K++ H++ LY A AE L K+ G VFF NSG EANE AI +AR + ++ II+L +++HG + AT Q +HH P P DG +YAK++ Sbjct: 10 VLHSYGRNYVQFTQGKNATLWDSEGKDYIDFASGIAVCSVGHGNERLAGAICDQAKKLIHTSNLYYIEPQARLAEKLV-KLSGYDMRVFFANSGAEANEGAIKIARKFGESHEGEVKRYKIITLESSFHGRTITALKATGQEK---------MHHYFGPYP-------DGFVYAKNL 169
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_STAES (Acetylornithine aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=argD PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14 Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 325 LFHLYSKP-LNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK-VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ 723 LF+ Y + + VD L D++ YLD GI G + + ++ NQ+ I HS LYL+ E +A K+ G + FF NSGTEANE AI +AR TG ++II+ + ++HG G M AT Q Sbjct: 4 LFNNYKRDNIEFVDANQNELIDKDNNVYLDFSSGIGVTNLGF-NMEIYQAVYNQLNLIWHSPNLYLS----SIQEEVAQKLIGQRDYLAFFCNSGTEANEAAIKLARKATGKSEIIAFKKSFHGRTYGAMSATGQ 133
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_STAEQ (Acetylornithine aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=argD PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14 Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 325 LFHLYSKP-LNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLK-VVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ 723 LF+ Y + + VD L D++ YLD GI G + + ++ NQ+ I HS LYL+ E +A K+ G + FF NSGTEANE AI +AR TG ++II+ + ++HG G M AT Q Sbjct: 4 LFNNYKRDNIEFVDANQNELIDKDNNVYLDFSSGIGVTNLGF-NMEIYQAVYNQLNLIWHSPNLYLS----SIQEEVAQKLIGQRDYLAFFCNSGTEANEAAIKLARKATGKSEIIAFKKSFHGRTYGAMSATGQ 133
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_MYXXA (Acetylornithine aminotransferase OS=Myxococcus xanthus GN=argD PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14 Identity = 53/171 (30.99%), Postives = 80/171 (46.78%), Query Frame = 1 Query: 277 SADEILAKRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCN------DIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHH 765 S D ++ K K L L + P + G+ ++D +GR YLD GGIAT GHCHP VV + Q+ + H + ++ + D A L L FF NSG EANE + + R ++IS +++HG T+ AT Q+ ++ F + G H Sbjct: 18 STDALVQKAKRHL---LQNYKQPPFVLARGQGARVWDMDGREYLDLIGGIATCALGHCHPEVVAAAKAQLDSLWHVSNVFYSQPQIDLAAQLTEW--SGLSRAFFCNSGAEANEALLKLTRKVMKDRGTPERFEVISFDSSFHGRTLATVTATGQAKYQKGFEPLPAGFTH 183
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SALAR (Putrescine aminotransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=patA PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13 Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L + G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVNTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAILAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ECO8A (Putrescine aminotransferase OS=Escherichia coli O8 (strain IAI1) GN=patA PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13 Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ +A+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTVAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_CLOAB (Acetylornithine aminotransferase OS=Clostridium acetobutylicum GN=argD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13 Identity = 41/130 (31.54%), Postives = 63/130 (48.46%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G+ L+D++G Y+D G+A C GHC+P +V +I Q ++ H + Y N + E L VF NSGTEA E + +AR Y +II + N++HG G + T Q ++ Sbjct: 20 GEGTKLYDKDGNEYIDFVSGVAVNCLGHCNPSIVKAIEEQSSKLMHVSNYYWNENAMELTEILCKN--SEFDKVFMCNSGTEAIEAGLKLARKYALLHGDENKKEIIYMDNSFHGRTMGALSVTGQPKYQ 147
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: YKAB_BACPF (Uncharacterized aminotransferase in katA 3'region OS=Bacillus pseudofirmus PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13 Identity = 48/148 (32.43%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 298 KRKTFLSPSLFHLYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNH-AIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMG-ATAQSNWK 735 K + L+PS+ + L VV + Y + +G +YLD GIA GH HP +V +I + H + + + +I A+ LA +PG+L FF NSGTEA E A+ +A+ T ++S +HG G++G +T++S ++ Sbjct: 11 KSASRLAPSMAKDHPN-LPVVKEEGCYYYGVDGVKYLDFTSGIAVTNVGHRHPKIVQAIKEAADHLTHGPIGVIQYESILKLADELADILPGDLDCFFFANSGTEAIEGALKLAKFVTKRPYVVSFTGCFHGRTQGSLGVSTSKSKYR 157
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SHIFL (Putrescine aminotransferase OS=Shigella flexneri GN=patA PE=3 SV=5) HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13 Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ +HG + G + ATA+S ++ Sbjct: 71 GGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGVFHGKSLGALSATAKSTFR 197 The following BLAST results are available for this feature:
BLAST of CF838605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838605 ID=CF838605; Name=CF838605; organism=Citrus sinensis; type=EST; length=844bpback to top |