CF838605

Overview
NameCF838605
Unique NameCF838605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length844
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_LISMF (Acetylornithine aminotransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=argD PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.765e-19
Identity = 54/135 (40.00%), Postives = 79/135 (58.52%), Query Frame = 1
Query:  325 LFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS 726
            +F  Y + P+++V+G    + D+NG+ YLD   GIA    GHC   V +++  Q+  I H++ LY        AE +A    G  ++VFF NSGTEANE A+ +AR YTG   II+   ++HG   G+M ATAQ+
Sbjct:    4 VFPTYKRFPIDLVNGTGTVVTDKNGKTYLDFTSGIAVCNLGHCPANVAEAVQQQLTNIWHTSNLYECALQDSVAELIAD---GKDRLVFFCNSGTEANEAALKLARKYTGKEKIITFEKSFHGRTFGSMSATAQA 135          
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_BACSU (Acetylornithine aminotransferase OS=Bacillus subtilis GN=argD PE=3 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19
Identity = 63/167 (37.72%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  322 SLFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGE 813
            SLF  Y +  +++   K  Y+ D+NG+ YLD   GIA    GHCH  V +++  Q+  + H + L+ N      A+ LA+   G+L  VFF NSG EANE AI +AR  TG   II+   ++HG     M AT Q   K  F  +  G H+    DP    F A GE
Sbjct:    3 SLFQTYGRWDIDIKKAKGTYVEDQNGKTYLDFIQGIAVSNLGHCHEAVTEAVKKQLDSVWHVSNLFQNSLQEQAAQKLAAHSAGDL--VFFCNSGAEANEGAIKLARKATGKTKIITFLQSFHGRTYAGMAATGQDKIKTGFGPMLGGFHYLPYNDP--SAFKALGE 165          
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_BACHD (Acetylornithine aminotransferase OS=Bacillus halodurans GN=argD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19
Identity = 58/150 (38.67%), Postives = 80/150 (53.33%), Query Frame = 1
Query:  325 LFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHH 765
            LF  Y+K  + +  GK   L+D  G  YLD   GIA    GHCHP VV ++  Q+    H + L+ +  I +   AL ++  G +  VFF NSG EANE AI +AR  TG ++I++   ++HG   GTM AT Q   K  F  +    HH
Sbjct:    4 LFPTYAKWDVTITSGKGTKLYDNQGNEYLDFVSGIAVCNLGHCHPKVVAAVEEQLHSFWHVSNLF-HIPIQENVAALLTEQSG-MDAVFFCNSGAEANEAAIKLARKATGKHEIVTFTQSFHGRTLGTMSATGQDKIKTGFGPMLETFHH 151          
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_BACAM (Acetylornithine aminotransferase (Fragment) OS=Bacillus amyloliquefaciens GN=argD PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19
Identity = 63/167 (37.72%), Postives = 86/167 (51.50%), Query Frame = 1
Query:  322 SLFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGE 813
            SLF  Y +  +++   K  Y+ D+NG+ YLD   GIA    GHCH  V +++  Q+  + H + L+ N      A+ LA+   G+L  VFF NSG EANE AI +AR  TG   II+   ++HG     M AT Q   K  F  +  G H+    DP    F A GE
Sbjct:    3 SLFQTYGRWDIDIKKAKGTYVEDQNGKTYLDFIQGIAVSNLGHCHEAVTEAVKKQLDSVWHVSNLFQNSLQEQAAQKLAAHSAGDL--VFFCNSGAEANEGAIKLARKATGKTKIITFLQSFHGRTYAGMAATGQDKIKTGFGPMLGGFHYLPYNDP--SAFKALGE 165          
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_LISMO (Acetylornithine aminotransferase OS=Listeria monocytogenes GN=argD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18
Identity = 52/135 (38.52%), Postives = 78/135 (57.78%), Query Frame = 1
Query:  325 LFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS 726
            +F  Y + P+++V+G    + D+NG+ YLD   GIA    GHC   V +++  Q+  I H++ LY        AE +A    G  ++VFF NSGTE+NE A+ +AR YTG   II+   ++HG   G+M AT Q+
Sbjct:    4 VFPTYKRFPIDLVNGTGTVVTDKNGKTYLDFTSGIAVCNLGHCPTNVAEAVQQQLGNIWHTSNLYECALQDSVAELIAD---GKERLVFFCNSGTESNEAALKLARKYTGKEKIITFEKSFHGRTFGSMSATGQA 135          
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_PYRHO (Acetylornithine/acetyl-lysine aminotransferase OS=Pyrococcus horikoshii GN=argD PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.494e-18
Identity = 51/146 (34.93%), Postives = 81/146 (55.48%), Query Frame = 1
Query:  334 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHH 765
            LY K L ++ G+  Y++D+ GRRY+D   GI     GH HP  V+ I  Q+ ++  +  ++ +    +  E L+  +  N + ++  NSGTEA E A+  ARLYTG  +II++ NA+HG   G + AT +  +K  F  +  G  H
Sbjct:    3 LYRKRLKIIKGEGIYVWDDQGRRYVDLIAGIGVAILGHNHPEWVEGIREQLNKLVIAGPMFNHEEKEEMLEELSKFV--NFEYLYMGNSGTEAVEAALKFARLYTGRKEIIAMVNAFHGRTMGALSATWKPKYKKDFEPLVPGFKH 146          
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_BACAN (Acetylornithine aminotransferase OS=Bacillus anthracis GN=argD PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.952e-18
Identity = 51/138 (36.96%), Postives = 74/138 (53.62%), Query Frame = 1
Query:  325 LFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK 735
            LF  Y +  +  V G    + D NG++YLD   GI     GHCHP V+ ++  Q+  I H + L+ N    + A  L   +   L  VFF NSG EANE A+ +AR +TG + +++   ++HG   GTM AT Q+  K
Sbjct:    5 LFQTYGRRTVEFVKGNGTKVIDNNGKQYLDFTSGIGVCNLGHCHPTVMKAVQEQLNDIWHISNLFTNSLQEEVASLLTENIA--LDYVFFCNSGAEANEAALKLARKHTGKSLVVTCEQSFHGRTFGTMSATGQNKVK 140          
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_LISIN (Acetylornithine aminotransferase OS=Listeria innocua GN=argD PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.549e-18
Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 1
Query:  325 LFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQS 726
            +F  Y++ P+++V G    + D  G+ YLD   GIA    GHC   V ++I +Q+  I H++ LY   A+ D    L +   G  K+VFF NSGTEANE A+ +AR YTG   II+   ++HG   G+M AT Q+
Sbjct:    4 VFPTYNRFPVDIVKGNGTVVKDATGKTYLDFTSGIAVCNLGHCPENVTEAIQSQLANIWHTSNLY-ECALQDSVAELITD--GTDKLVFFCNSGTEANEAALKLARKYTGKEKIITFEKSFHGRTFGSMSATGQA 135          
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_THEMA (Acetylornithine aminotransferase OS=Thermotoga maritima GN=argD PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18
Identity = 54/143 (37.76%), Postives = 79/143 (55.24%), Query Frame = 1
Query:  325 LFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCND-----IISLRNAYHGNAAGTMGATAQSNWK 735
            L + YS+ P   V GK  +++DE G  YLD   GIA    GH HP +V++I +Q +++ H + L+ N    + AE L+    G    VFF N+GTEANE AI +AR Y          I+S  N++HG   G++ AT Q  ++
Sbjct:    3 LMNTYSRFPATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTFGG--KVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQ 143          
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_PYRKO (Acetylornithine aminotransferase OS=Pyrococcus kodakaraensis GN=argD PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 52/146 (35.62%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  334 LYSKPLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHH 765
            LY K L +V G+  Y++DE GRRYLD   GI     GH HP  V  +  Q+++I  +  ++ +    +  E L+  +  + + V+  NSGTEA E AI  ARL TG ++I+++ NA+HG   G++ AT +  ++  F  +  G  H
Sbjct:    3 LYRKRLRLVRGEGVYVWDEKGRRYLDLIAGIGVNVLGHAHPEWVLDMSRQLEKIVVAGPMFEHDEREEMLEELSHWV--DYEYVYMGNSGTEAVEAAIKFARLATGRSEIVAMTNAFHGRTLGSLSATWKKKYREGFGPLVPGFKH 146          
The following BLAST results are available for this feature:
BLAST of CF838605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
ARGD_LISMF1.765e-1940.00Acetylornithine aminotransferase OS=Listeria monoc... [more]
ARGD_BACSU2.305e-1937.72Acetylornithine aminotransferase OS=Bacillus subti... [more]
ARGD_BACHD2.305e-1938.67Acetylornithine aminotransferase OS=Bacillus halod... [more]
ARGD_BACAM2.305e-1937.72Acetylornithine aminotransferase (Fragment) OS=Bac... [more]
ARGD_LISMO1.144e-1838.52Acetylornithine aminotransferase OS=Listeria monoc... [more]
ARGD_PYRHO1.494e-1834.93Acetylornithine/acetyl-lysine aminotransferase OS=... [more]
ARGD_BACAN1.952e-1836.96Acetylornithine aminotransferase OS=Bacillus anthr... [more]
ARGD_LISIN2.549e-1840.00Acetylornithine aminotransferase OS=Listeria innoc... [more]
ARGD_THEMA5.678e-1837.76Acetylornithine aminotransferase OS=Thermotoga mar... [more]
ARGD_PYRKO2.818e-1735.62Acetylornithine aminotransferase OS=Pyrococcus kod... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06A20_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06A20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838605 ID=CF838605; Name=CF838605; organism=Citrus sinensis; type=EST; length=844bp
CCGTTTCAGCGTCTCCAGCTCGCACCATAACTAAACCCGCATAAACAACA
AGACGCATAATACTGACTCCCGCATTTTCGGAATCTTTTACTGGCAGAGA
AAATGCAGAGATTCGCAGCCCGAAGGGTTTTATCGGAAACAAATTCTCTC
CGTCTGCCGCAGCGCTGCTTCTTCTCTCAGCTAGCACAGAAGGAAGAATC
ATCTCTGAACGAACATGAAACTTTTCTCCCGAGAATGCCCCCGTTCGATT
ATTCTCCCCCTCCCTACGACGGTCCGTCCGCCGATGAGATCCTCGCCAAA
CGCAAGACTTTTCTCAGCCCTTCATTGTTCCACTTGTACAGCAAACCCCT
GAACGTGGTGGATGGGAAGATGCAGTATTTGTTCGACGAAAACGGCCGTA
GATACCTGGACGCCTTCGGAGGGATTGCTACGGTCTGTTGCGGACACTGC
CATCCTTATGTGGTCGACTCAATCGTCAACCAAATCAAGCGCATACAACA
CTCCACTGTGCTTTATCTCAACCATGCAATCGCTGATTTCGCCGAGGCGT
TAGCCTCCAAAATGCCTGGCAATCTTAAGGTGGTTTTCTTTACAAATTCG
GGAACGGAAGCGAATGAGTTGGCGATAATGATGGCAAGATTATATACTGG
ATGCAATGATATAATATCACTGAGAAACGCCTATCATGGAAACGCAGCTG
GAACTATGGGCGCCACTGCTCAGTCCAACTGGAAATTTAACGTTGTTCAG
ACTGGCGTTCATCATGCCTTGAACCCCGACCCATACAGAGGAGTGTTTGG
TGCAGATGGCGAAATGTATGCTAAAGATGTTCAAGATCTCATTG
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