CF838605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ASTC_YERPS (Succinylornithine transaminase OS=Yersinia pseudotuberculosis GN=astC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = 1 Query: 355 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------------GCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPD 780 VV G+ L+D+ G+ Y+D GGIA GH HP V +++ Q ++ H Y N + A+ L + VFF NSG EANE A+ +AR Y N I++ RNA+HG T+ A Q + F + G+HH + D Sbjct: 27 VVRGEGSTLWDQQGKSYIDFAGGIAVNALGHGHPAVRAALIEQADKVWHLGNGYTNEPVLRLAKQLIDAT--FAEKVFFCNSGAEANEAALKLARKYALDNFANKAGQQGEKNQIVAFRNAFHGRTLFTVSAGGQPKYSQDFAPLPGGIHHGIFND 180
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ASTC_YERPG (Succinylornithine transaminase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=astC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = 1 Query: 355 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------------GCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPD 780 VV G+ L+D+ G+ Y+D GGIA GH HP V +++ Q ++ H Y N + A+ L + VFF NSG EANE A+ +AR Y N I++ RNA+HG T+ A Q + F + G+HH + D Sbjct: 27 VVRGEGSTLWDQQGKSYIDFAGGIAVNALGHGHPAVRAALIEQADKVWHLGNGYTNEPVLRLAKQLIDAT--FAEKVFFCNSGAEANEAALKLARKYALDNFANKAGQQGEKNQIVAFRNAFHGRTLFTVSAGGQPKYSQDFAPLPGGIHHGIFND 180
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ASTC_YERPE (Succinylornithine transaminase OS=Yersinia pestis GN=astC PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = 1 Query: 355 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------------GCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPD 780 VV G+ L+D+ G+ Y+D GGIA GH HP V +++ Q ++ H Y N + A+ L + VFF NSG EANE A+ +AR Y N I++ RNA+HG T+ A Q + F + G+HH + D Sbjct: 27 VVRGEGSTLWDQQGKSYIDFAGGIAVNALGHGHPAVRAALIEQADKVWHLGNGYTNEPVLRLAKQLIDAT--FAEKVFFCNSGAEANEAALKLARKYALDNFANKAGQQGEKNQIVAFRNAFHGRTLFTVSAGGQPKYSQDFAPLPGGIHHGIFND 180
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ASTC_YERPA (Succinylornithine transaminase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=astC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = 1 Query: 355 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------------GCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPD 780 VV G+ L+D+ G+ Y+D GGIA GH HP V +++ Q ++ H Y N + A+ L + VFF NSG EANE A+ +AR Y N I++ RNA+HG T+ A Q + F + G+HH + D Sbjct: 27 VVRGEGSTLWDQQGKSYIDFAGGIAVNALGHGHPAVRAALIEQADKVWHLGNGYTNEPVLRLAKQLIDAT--FAEKVFFCNSGAEANEAALKLARKYALDNFANKAGQQGEKNQIVAFRNAFHGRTLFTVSAGGQPKYSQDFAPLPGGIHHGIFND 180
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ASTC_YERP3 (Succinylornithine transaminase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=astC PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 52/156 (33.33%), Postives = 75/156 (48.08%), Query Frame = 1 Query: 355 VVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------------GCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPD 780 VV G+ L+D+ G+ Y+D GGIA GH HP V +++ Q ++ H Y N + A+ L + VFF NSG EANE A+ +AR Y N I++ RNA+HG T+ A Q + F + G+HH + D Sbjct: 27 VVRGEGSTLWDQQGKSYIDFAGGIAVNALGHGHPAVRAALIEQADKVWHLGNGYTNEPVLRLAKQLIDAT--FAEKVFFCNSGAEANEAALKLARKYALDNFANKAGQQGEKNQIVAFRNAFHGRTLFTVSAGGQPKYSQDFAPLPGGIHHGIFND 180
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_AERPE (Acetylornithine/acetyl-lysine aminotransferase OS=Aeropyrum pernix GN=argD PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 39/132 (29.55%), Postives = 72/132 (54.55%), Query Frame = 1 Query: 349 LNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV 744 L +V G MQY++D++GR+YLD G GH +P +V+++V Q + + ++ + ++ + + P + + F N+GTEA E A+ A L TG I++L+N++HG ++ T ++ V Sbjct: 16 LRIVKGSMQYVWDDSGRKYLDCHAGHGAAFLGHSNPAIVEAVVRQARELVAASSSFSTPSLEEALTEFSRIAPPWAEEIVFLNTGTEAVEAALKAAWLATGKRGIVALKNSFHGRTLASLSVTWNPRYRRGV 147
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_CITK8 (Putrescine aminotransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=patA PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.309e-14 Identity = 48/128 (37.50%), Postives = 73/128 (57.03%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF+NSGTE+ E A+ +A+ Y G I+ A+HG + G++ ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFSNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGSLSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ENT38 (Putrescine aminotransferase OS=Enterobacter sp. (strain 638) GN=patA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.710e-14 Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF+NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFSNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_THEEB (Acetylornithine aminotransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=argD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.233e-14 Identity = 48/136 (35.29%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 346 PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNWK 735 P+ +V G+ ++D+ GR YLD GIAT GH HP +V+++ Q++ + H + LY A+ L + G+ VFF NSG EANE AI +AR Y II+ + ++HG T+ AT Q ++ Sbjct: 26 PITLVRGEGCRVWDDQGRSYLDFVAGIATCTLGHAHPALVETVSRQMQTLHHVSNLYYIPQQGALAQWLVAHSCGDR--VFFCNSGAEANEAAIKLARKYAHTVRHIANPIIITAQASFHGRTLATITATGQPKYQ 159
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_STRAW (Acetylornithine aminotransferase OS=Streptomyces avermitilis GN=argD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.233e-14 Identity = 48/135 (35.56%), Postives = 73/135 (54.07%), Query Frame = 1 Query: 322 SLFHLYSKP-LNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGCNDIISLRNAYHGNAAGTMGATAQ 723 +L + Y P L +V G L+D +G+ YLD GGIA GH HP +V+++ QI + H + L++ AE L ++ G V+F NSG EANE A + RL TG + +++ + +HG G + T Q Sbjct: 17 ALMNNYGTPRLPLVRGAGTRLWDADGKEYLDFVGGIAVNALGHAHPAIVEAVSTQIASLGHVSNLFVAEPPVALAERLL-QLFGRDGRVYFCNSGAEANEAAFKIGRL-TGRSHMVATQGGFHGRTMGALALTGQ 149 The following BLAST results are available for this feature:
BLAST of CF838605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838605 ID=CF838605; Name=CF838605; organism=Citrus sinensis; type=EST; length=844bpback to top |