CF838605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_NEIMB (Acetylornithine aminotransferase OS=Neisseria meningitidis serogroup B GN=argD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.233e-14 Identity = 45/126 (35.71%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 379 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGN--LKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNW 732 ++D GR Y+D GGIA GHCHP +VD++ Q+ ++ H + +Y A+ LA K+ N VFF NSG+EANE A+ +AR Y G ++I++ N++HG T+ Q + Sbjct: 24 VWDTKGREYIDFSGGIAVNALGHCHPALVDALNAQMHKLWHISNIYTTRP----AQELAQKLVANSFADKVFFCNSGSEANEAALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKY 145
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_NEIMA (Acetylornithine aminotransferase OS=Neisseria meningitidis serogroup A GN=argD PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.233e-14 Identity = 45/126 (35.71%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 379 LFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGN--LKVVFFTNSGTEANELAIMMARLYT------GCNDIISLRNAYHGNAAGTMGATAQSNW 732 ++D GR Y+D GGIA GHCHP +VD++ Q+ ++ H + +Y A+ LA K+ N VFF NSG+EANE A+ +AR Y G ++I++ N++HG T+ Q + Sbjct: 24 VWDTEGREYIDFSGGIAVNALGHCHPALVDALNAQMHKLWHISNIYTTRP----AQELAQKLVANSFADKVFFCNSGSEANEAALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKY 145
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SHISS (Putrescine aminotransferase OS=Shigella sonnei (strain Ss046) GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SHIBS (Putrescine aminotransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SALTY (Putrescine aminotransferase OS=Salmonella typhimurium GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SALTI (Putrescine aminotransferase OS=Salmonella typhi GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SALSV (Putrescine aminotransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=patA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SALPK (Putrescine aminotransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SALPB (Putrescine aminotransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=patA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALAPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_SALPA (Putrescine aminotransferase OS=Salmonella paratyphi A GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197 The following BLAST results are available for this feature:
BLAST of CF838605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838605 ID=CF838605; Name=CF838605; organism=Citrus sinensis; type=EST; length=844bpback to top |