CF838605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ECODH (Putrescine aminotransferase OS=Escherichia coli (strain K12 / DH10B) GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ECOBW (Putrescine aminotransferase OS=Escherichia coli (strain K12 / BW2952) GN=patA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ECO7I (Putrescine aminotransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_XYLFT (Acetylornithine aminotransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=argD PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.916e-14 Identity = 52/157 (33.12%), Postives = 82/157 (52.23%), Query Frame = 1 Query: 295 AKRKTFLSPSLFHL-YSKPLNVV--DGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC-------NDIISLRNAYHGNAAGTMGATAQSNWK 735 A ++ LS S ++L +P VV G+ ++DE GR YLD GIA C GHC P +V ++V Q R+ H++ ++ + A+ L + + VF +SGTEANE AI + R + I++ R ++HG G + ATAQ ++ Sbjct: 3 AVSESVLSLSRYYLPVYRPCQVVLVRGQGSRVWDEQGRDYLDLAAGIAVCCLGHCDPDLVAALVEQAGRLWHTSNVFYSEPSLRLAQELVD-VSRFAERVFLCSSGTEANEAAIKLVRKWAAAQGRLPEHRTIVTFRGSFHGRTLGAVTATAQPKYQ 158
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: ARGD_ANASP (Acetylornithine aminotransferase OS=Anabaena sp. (strain PCC 7120) GN=argD PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.809e-14 Identity = 57/178 (32.02%), Postives = 86/178 (48.31%), Query Frame = 1 Query: 259 PPYDGPSADEILAKRKTFLSPSLFHLYSK-PLNVVDGKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQIKRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLYTGC-----NDIISLRNA-YHGNAAGTMGATAQSNWK--FNVVQTGVHH 765 PP G +A + S+ Y + PL + G ++D G+ YLD GIAT GH HP +V+++ QI+++ H + LY + A+ + + VFF NSG EANE AI +AR Y II NA +HG T+ AT Q+ ++ F+ + G H+ Sbjct: 13 PPESGSAASSPFSTDS--FDASVMSTYGRFPLALERGAGCRVWDTQGKEYLDFVAGIATCTLGHAHPAMVEAVTRQIQKLHHVSNLYYIPEQGELAQWIIQHSCADR--VFFCNSGAEANEAAIKLARKYAHTVLDIEKPIILTANASFHGRTLATITATGQAKYQKYFDPLVPGFHY 186
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ESCF3 (Putrescine aminotransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=patA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ECOUT (Putrescine aminotransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=patA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ECOSM (Putrescine aminotransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=patA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ECOSE (Putrescine aminotransferase OS=Escherichia coli (strain SE11) GN=patA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197
BLAST of CF838605 vs. ExPASy Swiss-Prot
Match: PAT_ECOLU (Putrescine aminotransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=patA PE=3 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 4.974e-14 Identity = 48/128 (37.50%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 364 GKMQYLFDENGRRYLDAFGGIATVCCGHCHPYVVDSIVNQI-KRIQHSTVLYLNHAIADFAEALASKMPGNLKVVFFTNSGTEANELAIMMARLY---TGCNDIISLRNAYHGNAAGTMGATAQSNWK 735 G + L D G+ ++D GG GH +P VV ++ NQ+ K+ HS L L+ A A+ LA+ PG LK FF NSGTE+ E A+ +A+ Y G I+ A+HG + G + ATA+S ++ Sbjct: 71 GGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQEL-LDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFR 197 The following BLAST results are available for this feature:
BLAST of CF838605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 250
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838605 ID=CF838605; Name=CF838605; organism=Citrus sinensis; type=EST; length=844bpback to top |