CF838609

Overview
NameCF838609
Unique NameCF838609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.148e-36
Identity = 72/110 (65.45%), Postives = 86/110 (78.18%), Query Frame = 1
Query:    1 PDLALYGEKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKN-SLRLDDWVLCRIYNKKGS 324
            P+   +GE EWYFF+PR RKYPNG RPNRAA SGYWKATG DK I      VG+KKALVFY G+ PKG KT+WIMHEYRL D  +++ K+N S+RLD+WVLCRIY K+G+
Sbjct:   55 PEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGA 164          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.710e-28
Identity = 62/115 (53.91%), Postives = 77/115 (66.96%), Query Frame = 1
Query:    1 PDLALYGEKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPIGQPKP---VGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ 336
            P+ A  GEKEWYFFT R RKYP G R NRA  +GYWKATG D+ I   K    +G+KK LVFY G+APKGEK+ W+MHEYRL D   S    +S   D+WVLC++  K G + ++
Sbjct:   66 PEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL-DGKFSYHYISSSAKDEWVLCKVCLKSGVVSRE 179          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.272e-27
Identity = 59/110 (53.64%), Postives = 77/110 (70.00%), Query Frame = 1
Query:    1 PDLALYGEKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI---GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG 321
            P++A  GE+EWYF++ R RKYP G R NRA  +GYWKATG DK +   G  + VG+KK LVFY G+AP+G KT W+MHEYRL + D S R       ++WV+CR++NK G
Sbjct:   68 PEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLEN-DHSHRHTCK---EEWVICRVFNKTG 173          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.701e-27
Identity = 60/136 (44.12%), Postives = 79/136 (58.09%), Query Frame = 1
Query:    1 PDLALYGEKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI---GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS---------------ARKKNSLRL---DDWVLCRIYNKKGSIEKQQQV 345
            P LA  GEKEWYF+ PR RKY N +RPNR  G G+WKATG D+PI      + +G+KK+LVFY G+A KG KT+W+MHE+RL  +  S                   NS  L   D W +CRI+ K  ++  Q+ +
Sbjct:   66 PKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKKTNAVSSQRSI 201          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC9_ARATH (Putative NAC domain-containing protein 9 OS=Arabidopsis thaliana GN=NAC009 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.313e-27
Identity = 79/262 (30.15%), Postives = 120/262 (45.80%), Query Frame = 1
Query:    1 PDLALYGEKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPIGQP---KPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSL------RLDDWVLCRIYNKKGSIEKQ------------QQVTNRRPNFXXXXXXXXXKKPVVMPSGMDTSTSGGALLPNPA-STVTGTGTVNDYMYFD-TSDSVPK--LNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLS 711
            P  A+ GEKEWYF+ PR RKY N SRPNR  G+G+WKATG D+PI      K +G+KK+LVFY G+A KG KT+W+MHE+RL  +   +              D W +CRI+ K  +   +            +  T+   N             ++ PS            P  + ST     T++ + Y D TS   P    N  S   +  ++  F    +++P+     ++   P   L+++ D +F  +   +  LS
Sbjct:   62 PKFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKTNTTTLRALSHSFVSSLPPETSTDTMSNQKQSNTYHFSSDKILKPSSHFQFHHENMNTPKTSNSTTPSVPTISPFSYLDFTSYDKPTNVFNPVSCLDQQYLTNLFLATQETQPQFPRLPSSNEIPSFLLNTSSDSTFLGEFTSHIDLS 323          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.399e-26
Identity = 60/114 (52.63%), Postives = 74/114 (64.91%), Query Frame = 1
Query:    1 PDLALYGEKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPIGQPKP---VGIKKALVFYAGKAPKGEKTNWIMHEYRLAD------VDRSARKKNSLRLDDWVLCRIYNK 315
            P  A  GEKEWYFF+ R RKYP G R NRA  +GYWKATG D+ I   K    VG+KK LVFY G+APKGEK+NW+MHEYRL        + RS++       D+WV+ R++ K
Sbjct:   63 PGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSK-------DEWVISRVFQK 169          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 9.116e-26
Identity = 53/106 (50.00%), Postives = 71/106 (66.98%), Query Frame = 1
Query:    1 PDLALYGEKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNK 315
            P +A  G K+WYF++ R RKY  G R NRA  +GYWKATG D+ I  + K VG++K LVFY G+AP+G KT+W+MHE+RL           S   +DWVLCR+++K
Sbjct:   66 PKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHK 171          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.717e-25
Identity = 62/147 (42.18%), Postives = 85/147 (57.82%), Query Frame = 1
Query:    1 PDLALYGEKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNRRPNFXXXXXXXXXKKPVVMPSGMDTSTS 438
            P ++  GEKEWYFF  R RKY N  RPNR  GSG+WKATG DKP+      VG+KK+LV+Y G A KG KT+W+MHE+RL    ++     + + + W LCRI+ +   +  Q+  T   PN          +KPV+  +   + TS
Sbjct:   64 PRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNLDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTKT--DSPAQQAEVWTLCRIFKR---VTSQRNPTILPPN----------RKPVITLTDTCSKTS 195          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.316e-24
Identity = 62/135 (45.93%), Postives = 79/135 (58.52%), Query Frame = 1
Query:    1 PDLALYGEKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI-GQP----------------KPVGIKKALVFYAGKAPKGEKTNWIMHEYRL-ADVDRSARKKNSLRLDDWVLCRIYNKK---GSIEKQQQ 342
            P  A  GEKEWYFF+ +  KYP G R NRA   GYWKATG D+ I  QP                + VG+KK LVFY G+APKG KTNW+MHE+RL A++            D+WV+C++++KK    +I  QQQ
Sbjct:   65 PSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLHNHHPNLRLNPKDEWVVCKVFHKKQGDEAINNQQQ 199          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC78_ARATH (NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.002e-24
Identity = 52/100 (52.00%), Postives = 70/100 (70.00%), Query Frame = 1
Query:   28 EWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPIGQ-PKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGS 324
            EWYFF+   +KY NGS+ NRA   GYWK TG D+ I    + VG+KK LV++ G+AP+GE+TNW+MHEYRL+D D    KK  +  + +VLCRI+ K G+
Sbjct:   66 EWYFFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTNWVMHEYRLSDED---LKKAGVPQEAYVLCRIFQKSGT 162          
The following BLAST results are available for this feature:
BLAST of CF838609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NAC29_ARATH1.148e-3665.45NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC54_ARATH5.710e-2853.91Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC31_ARATH1.272e-2753.64Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC94_ARATH3.701e-2744.12Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC9_ARATH6.313e-2730.15Putative NAC domain-containing protein 9 OS=Arabid... [more]
NAC98_ARATH2.399e-2652.63Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC22_ARATH9.116e-2650.00NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC42_ARATH7.717e-2542.18NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC77_ORYSJ1.316e-2445.93NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC78_ARATH5.002e-2452.00NAC domain-containing protein 78 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06B01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838609 ID=CF838609; Name=CF838609; organism=Citrus sinensis; type=EST; length=810bp
CCAGATTTGGCCCTGTACGGGGAAAAGGAGTGGTACTTTTTTACGCCTAG
GCATCGGAAGTATCCAAACGGTTCAAGGCCGAACCGGGCGGCGGGGAGCG
GGTACTGGAAGGCAACAGGAGCCGATAAGCCGATTGGCCAGCCGAAGCCC
GTTGGAATTAAGAAGGCTCTTGTTTTTTACGCCGGAAAAGCGCCTAAAGG
AGAGAAAACCAACTGGATTATGCACGAGTATCGGTTAGCTGACGTGGATC
GCTCGGCTCGTAAGAAGAACAGCTTAAGGCTGGACGATTGGGTGCTGTGT
CGCATATACAACAAGAAGGGATCTATTGAGAAACAACAGCAGGTCACTAA
TCGGAGGCCGAATTTTACGGAGACGGAGACGGAGACGGAGGAGAAGAAAC
CGGTGGTTATGCCAAGTGGCATGGACACGTCAACGTCAGGAGGAGCACTG
CTTCCGAATCCGGCGTCGACCGTAACGGGAACGGGAACAGTGAATGATTA
CATGTATTTTGACACGTCGGATTCGGTGCCGAAGCTGAACACGGACTCGA
GTTGCTCGGAGCACGTGGTGTCACCGGAGTTCACGTGCGAGGTGCAGAGC
GAGCCTAAAATGCAACCCTGGGAAAACACCCTTGGTTTTCCATATAATTA
CTTGGATTCCGCCATGGACATAAGCTTCAATTCTCAGTTGCAGGGAAACA
ATCAGCTGTCGCCGTTGCAGGATATGTTCATGTACTTTACGAAACCCTTT
TAAATTTGGGTCGAGTGGATGGACCATAGACGGGATGGGATGGGCTGGGC
TGGGCTGGCC
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