CF838609

Overview
NameCF838609
Unique NameCF838609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.223e-23
Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 1
Query:   22 EKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI--GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKK 318
            + EWYFF+ + +KYP G+R NRA  +G+WKATG DK I       +G++K LVFY G+AP G+KT+WIMHEYRL D D        ++ D WV+CR++ KK
Sbjct:   66 QNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACRIGMRKTLVFYVGRAPHGKKTDWIMHEYRL-DQDNV-----DVQEDGWVVCRVFMKK 160          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.102e-22
Identity = 49/107 (45.79%), Postives = 69/107 (64.49%), Query Frame = 1
Query:   22 EKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS-------ARKKNSLRLDDWVLCRIYNKK 318
            + +WYFF+ + +KYP G+R NRA  +G+WKATG DK I    + +G++K LVFY G+AP G+K++WIMHEYRL D   S            S   + WV+CR++ KK
Sbjct:   72 QNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKIICSCVRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRKK 178          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.986e-22
Identity = 45/100 (45.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:   22 EKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKK 318
            + +WYFF+ + +KYP G+R NRA  +G+WKATG DK I  +   +G++K LVFY G+AP G+K++WIMHEYRL   +    ++     + WV+CR++ K+
Sbjct:   63 QSDWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQE-----EGWVVCRVFKKR 157          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC43_ARATH (NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.986e-22
Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 1
Query:   22 EKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLAD-----VDRSARKKNSL-----RLDDWVLCRIYNKK 318
            + +WYFF+ + +KYP G+R NRA  +G+WKATG DK I    + +G++K LVFY G+AP G+K++WIMHEYRL D      D +  +  S+     + + WV+CRI+ KK
Sbjct:   72 QNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKK 181          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC66_ARATH (NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.569e-20
Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 1
Query:   22 EKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRL---------ADVDRSARKKNSLRLDD-WVLCRIYNK----KGSIEKQQQVTNRRPNF 366
            + +WYF++ + +KYP G+R NRA   G+WKATG DK I      +G++K LVFY G+AP G+K++WIMHEYRL          D D +    + +  D+ WV+CR++ K    K  I      + + P+F
Sbjct:   67 QNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKNNLCKNMISSSPASSVKTPSF 196          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.382e-20
Identity = 57/148 (38.51%), Postives = 76/148 (51.35%), Query Frame = 1
Query:   25 KEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI--GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNRRPNFXXXXXXXXXKKPVV------MPSGMDTSTSGG 444
            ++W+FF PR  +   G RP+R  GSGYWKATG+  P+     K +G KK +VFY GKAP G KT W M+EY   D   +A     LR  ++ LCR+Y   GS     +  +RRP               V      + S ++TS SGG
Sbjct:   65 EQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKDNKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDETVNASTIPKLR-REFSLCRVYITTGS----SRAFDRRPEGVLQTERMLTSDVAVAETSFRVESSLETSISGG 207          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC74_ORYSJ (NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.840e-19
Identity = 47/96 (48.96%), Postives = 61/96 (63.54%), Query Frame = 1
Query:   22 EKEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPIGQPK-PVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRI 306
            + +W+FF  R RKYPNGSR NRA  +GYWK+TG D+ I   K  +G KK LVF+ G+ P G +T WIMHEY + + +  A        D +VLCRI
Sbjct:   64 DNKWHFFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTEWIMHEYYIDERECQACPDMK---DAYVLCRI 156          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.357e-18
Identity = 53/162 (32.72%), Postives = 79/162 (48.77%), Query Frame = 1
Query:   25 KEWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPIGQP--KPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVD--RSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNRRPNFXXXXXXXXXKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVND 498
            ++W FF PR  +   G RP+R  GSGYWKATG+  P+  P  + +G+KK +VFY GKAP G KT W M+EY+  +     +  K  S R  D      Y  + ++      T+ R                 + +  +TS SGG  +  P +  T T +++D
Sbjct:   64 EQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPDNRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAVETASVSTIPKSGSSRAFDRRPTEAYAIERNLPSNGVETSSR---------------ATISTSPETSHSGGNQVDLPVNATTITQSISD 210          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.250e-15
Identity = 41/105 (39.05%), Postives = 58/105 (55.24%), Query Frame = 1
Query:   28 EWYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI----GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIE 330
            EWYFF+P     PN  +  R  GSG+WK TG D+ I    G    +GIKK LV++ GK+P G +T W+MHEY +  +    RK        +V+C++  K  + E
Sbjct:   63 EWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHITCLPHHKRK--------YVVCQVKYKGEAAE 159          
BLAST of CF838609 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.365e-13
Identity = 38/99 (38.38%), Postives = 52/99 (52.53%), Query Frame = 1
Query:   31 WYFFTPRHRKYPNGSRPNRAAGSGYWKATGADKPI----GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNK 315
            WYFF P+           R   SGYWKATG D+ I    G    +GIKK LV+Y G+ PKG  T W+MHEY +  + +  R        ++V+C++  K
Sbjct:   63 WYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHITCLPQDQR--------NYVICQVMYK 153          
The following BLAST results are available for this feature:
BLAST of CF838609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
NAC76_ORYSJ7.223e-2350.50NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC12_ARATH2.102e-2245.79NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC7_ARATH7.986e-2245.00NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC43_ARATH7.986e-2245.45NAC domain-containing protein 43 OS=Arabidopsis th... [more]
NAC66_ARATH2.569e-2039.23NAC domain-containing protein 66 OS=Arabidopsis th... [more]
NAC90_ARATH4.382e-2038.51NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC74_ORYSJ2.840e-1948.96NAC domain-containing protein 74 OS=Oryza sativa s... [more]
NAC61_ARATH5.357e-1832.72Putative NAC domain-containing protein 61 OS=Arabi... [more]
NAC68_ARATH3.250e-1539.05NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC69_ARATH1.365e-1338.38NAC domain-containing protein 69 OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_06B01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838609 ID=CF838609; Name=CF838609; organism=Citrus sinensis; type=EST; length=810bp
CCAGATTTGGCCCTGTACGGGGAAAAGGAGTGGTACTTTTTTACGCCTAG
GCATCGGAAGTATCCAAACGGTTCAAGGCCGAACCGGGCGGCGGGGAGCG
GGTACTGGAAGGCAACAGGAGCCGATAAGCCGATTGGCCAGCCGAAGCCC
GTTGGAATTAAGAAGGCTCTTGTTTTTTACGCCGGAAAAGCGCCTAAAGG
AGAGAAAACCAACTGGATTATGCACGAGTATCGGTTAGCTGACGTGGATC
GCTCGGCTCGTAAGAAGAACAGCTTAAGGCTGGACGATTGGGTGCTGTGT
CGCATATACAACAAGAAGGGATCTATTGAGAAACAACAGCAGGTCACTAA
TCGGAGGCCGAATTTTACGGAGACGGAGACGGAGACGGAGGAGAAGAAAC
CGGTGGTTATGCCAAGTGGCATGGACACGTCAACGTCAGGAGGAGCACTG
CTTCCGAATCCGGCGTCGACCGTAACGGGAACGGGAACAGTGAATGATTA
CATGTATTTTGACACGTCGGATTCGGTGCCGAAGCTGAACACGGACTCGA
GTTGCTCGGAGCACGTGGTGTCACCGGAGTTCACGTGCGAGGTGCAGAGC
GAGCCTAAAATGCAACCCTGGGAAAACACCCTTGGTTTTCCATATAATTA
CTTGGATTCCGCCATGGACATAAGCTTCAATTCTCAGTTGCAGGGAAACA
ATCAGCTGTCGCCGTTGCAGGATATGTTCATGTACTTTACGAAACCCTTT
TAAATTTGGGTCGAGTGGATGGACCATAGACGGGATGGGATGGGCTGGGC
TGGGCTGGCC
back to top