CF838650

Overview
NameCF838650
Unique NameCF838650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF838650 vs. ExPASy Swiss-Prot
Match: EF1A1_RABIT (Elongation factor 1-alpha 1 OS=Oryctolagus cuniculus GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51
Identity = 98/132 (74.24%), Postives = 115/132 (87.12%), Query Frame = 2 
Query:    2 KNVAFKDLKRGFVASNSQDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 397
            KNV+ KD++RG VA +S++DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  313 KNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CF838650 vs. ExPASy Swiss-Prot
Match: EF1A1_PONAB (Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF1A1 PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51
Identity = 98/132 (74.24%), Postives = 115/132 (87.12%), Query Frame = 2 
Query:    2 KNVAFKDLKRGFVASNSQDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 397
            KNV+ KD++RG VA +S++DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  313 KNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CF838650 vs. ExPASy Swiss-Prot
Match: EF1A1_PANTR (Elongation factor 1-alpha 1 OS=Pan troglodytes GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51
Identity = 98/132 (74.24%), Postives = 115/132 (87.12%), Query Frame = 2 
Query:    2 KNVAFKDLKRGFVASNSQDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 397
            KNV+ KD++RG VA +S++DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  313 KNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CF838650 vs. ExPASy Swiss-Prot
Match: EF1A1_MOUSE (Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef1a1 PE=1 SV=3)

HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51
Identity = 98/132 (74.24%), Postives = 115/132 (87.12%), Query Frame = 2 
Query:    2 KNVAFKDLKRGFVASNSQDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 397
            KNV+ KD++RG VA +S++DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  313 KNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CF838650 vs. ExPASy Swiss-Prot
Match: EF1A1_HUMAN (Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51
Identity = 98/132 (74.24%), Postives = 115/132 (87.12%), Query Frame = 2 
Query:    2 KNVAFKDLKRGFVASNSQDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 397
            KNV+ KD++RG VA +S++DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  313 KNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CF838650 vs. ExPASy Swiss-Prot
Match: EF1A1_FELCA (Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51
Identity = 98/132 (74.24%), Postives = 115/132 (87.12%), Query Frame = 2 
Query:    2 KNVAFKDLKRGFVASNSQDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 397
            KNV+ KD++RG VA +S++DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  313 KNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CF838650 vs. ExPASy Swiss-Prot
Match: EF1A1_CRIGR (Elongation factor 1-alpha 1 OS=Cricetulus griseus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51
Identity = 98/132 (74.24%), Postives = 115/132 (87.12%), Query Frame = 2 
Query:    2 KNVAFKDLKRGFVASNSQDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 397
            KNV+ KD++RG VA +S++DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  313 KNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CF838650 vs. ExPASy Swiss-Prot
Match: EF1A1_BOVIN (Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.668e-51
Identity = 98/132 (74.24%), Postives = 115/132 (87.12%), Query Frame = 2 
Query:    2 KNVAFKDLKRGFVASNSQDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 397
            KNV+ KD++RG VA +S++DP  EAA FT+QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  313 KNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CF838650 vs. ExPASy Swiss-Prot
Match: EF1A_DANRE (Elongation factor 1-alpha OS=Danio rerio GN=eef1a PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.179e-51
Identity = 98/132 (74.24%), Postives = 114/132 (86.36%), Query Frame = 2 
Query:    2 KNVAFKDLKRGFVASNSQDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 397
            KNV+ KD++RG VA +S++DP  EAANF +QVII+NHPGQI  GYAPVLDCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIKSVEKK
Sbjct:  313 KNVSVKDIRRGNVAGDSKNDPPMEAANFNAQVIILNHPGQISQGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKALKSGDAAIVEMVPGKPMCVESFSTYPPLGRFAVRDMRQTVAVGVIKSVEKK 444
[Close]
BLAST of CF838650 vs. ExPASy Swiss-Prot
Match: EF1A3_OSCTI (Elongation factor 1-alpha 3 OS=Oscheius tipulae GN=eft-3 PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.846e-51
Identity = 95/136 (69.85%), Postives = 116/136 (85.29%), Query Frame = 2 
Query:    2 KNVAFKDLKRGFVASNSQDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDPTG 409
            KNV+ KD++RG V S+S++DPA+E+ NFT+QVI+MNHPGQI  GY PVLDCHT+HIA KF+EL  K+DRR+GK  E  PKFLK+GDAG+V++IPTKP  VE+F+DY PLGRFAVRDMRQTVAVGVIKSV K D +G
Sbjct:  314 KNVSVKDIRRGSVCSDSKNDPAKESKNFTAQVIVMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRTGKSTEASPKFLKSGDAGIVELIPTKPPCVESFTDYAPLGRFAVRDMRQTVAVGVIKSVTKDDGSG 449
The following BLAST results are available for this feature:
BLAST of CF838650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A1_RABIT1.668e-5174.24Elongation factor 1-alpha 1 OS=Oryctolagus cunicul... [more]
EF1A1_PONAB1.668e-5174.24Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF... [more]
EF1A1_PANTR1.668e-5174.24Elongation factor 1-alpha 1 OS=Pan troglodytes GN=... [more]
EF1A1_MOUSE1.668e-5174.24Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef... [more]
EF1A1_HUMAN1.668e-5174.24Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF... [more]
EF1A1_FELCA1.668e-5174.24Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1... [more]
EF1A1_CRIGR1.668e-5174.24Elongation factor 1-alpha 1 OS=Cricetulus griseus ... [more]
EF1A1_BOVIN1.668e-5174.24Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A... [more]
EF1A_DANRE2.179e-5174.24Elongation factor 1-alpha OS=Danio rerio GN=eef1a ... [more]
EF1A3_OSCTI2.846e-5169.85Elongation factor 1-alpha 3 OS=Oscheius tipulae GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06D01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838650 ID=CF838650; Name=CF838650; organism=Citrus sinensis; type=EST; length=698bp
GAAGAACGTTGCTTTCAAGGATCTCAAGCGTGGTTTTGTTGCTTCCAACT
CCCAGGATGATCCGGCCAGGGAAGCTGCCAACTTCACCTCACAGGTCATC
ATCATGAACCACCCTGGCCAGATTGGAAATGGATATGCCCCAGTGCTTGA
CTGCCACACCTCCCACATTGCCGTCAAGTTTTCTGAGCTCGTGACGAAGA
TTGATAGGCGATCAGGCAAGGAGCTTGAGAAGGAGCCCAAGTTCTTGAAG
AATGGAGACGCCGGAATGGTTAAGATGATTCCCACCAAGCCCATGGTTGT
TGAAACCTTCTCCGATTACCCACCCCTTGGTCGTTTTGCTGTTAGGGACA
TGCGTCAGACTGTTGCTGTGGGTGTTATCAAGAGTGTTGAGAAGAAGGAT
CCCACAGGTGCGAAGGTCACCAAGTCCGCAGCCAAGAAGAAATGAGAAAT
TTTTATGGGTCTGTCTACAATAGTTAGGGTTTATTTTCTGTCTTTTTTTA
TTTTCTTGTCTGTTTTTGTTTTGCATCAATGTTTCTGCAAACAGCCCTAT
TTGCTTCCACCAGTTTGCTGTTGAGCAATTGGGATGTTATCTTTCTGCTT
AACTGGCTGTGGTGGGTGTTCGGATTTTTATATTCTGAATTTGGTTAATA
GCACTAAATTGAGTTGTGAAGTTTAAAAAAANAAAAAAAAAAAAAAAA
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