CF838698

Overview
NameCF838698
Unique NameCF838698
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: RAI14_MOUSE (Ankycorbin OS=Mus musculus GN=Rai14 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.925e-13
Identity = 52/161 (32.30%), Postives = 78/161 (48.45%), Query Frame = -1
Query:  334 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDE--SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 810
            WN  D   +L +A+     GDA   A   G   A    ++ E  +  H  A+ G  E LK  +  G D   +DS G +ALH A   G  +C + LL+  +  + +D +  TALHYAA  G  + V LL E+ + + L+++DG  P+ VA  N   +    L
Sbjct:   16 WNKND--DRLLQAVE---NGDAEKVASLLGKKGASATKHDSEGKTAFHLAAAKGHVECLKVMVTHGVDVTAQDSSGHSALHVAAKNGHPECIRKLLQYKSPAENIDNSGKTALHYAAAQGCLQAVQLLCEHKSPINLKDLDGNIPLLVAVQNGHSEACHFL 171          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: NOTC4_MOUSE (Neurogenic locus notch homolog protein 4 OS=Mus musculus GN=Notch4 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 45/104 (43.27%), Postives = 59/104 (56.73%), Query Frame = -1
Query:  331 LKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE 642
            ++  +AA AD    D  G+TALH+A      + A+ LL+AGA+ DA D  + T L  AA  G  E   LLLE GAA  L++  G  P DVA+  S  D+L LLE
Sbjct: 1712 VEELIAARADVGARDKRGKTALHWAAAVNNARAARSLLQAGADKDAQDSREQTPLFLAAREGAVEVAQLLLELGAARGLRDQAGLAPGDVARQRSHWDLLTLLE 1815          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR44_CHICK (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus GN=ANKRD44 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = -1
Query:  334 DSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 600
            D  GRTALH A   G V+   +LL  GAN++A DK    ALH+AA  G  E VALL+ +GA VT ++  G TP+  A  N Q +++K L
Sbjct:  137 DRGGRTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLEVVALLINHGAEVTCKDKKGYTPLHAAASNGQINIVKHL 225          

HSP 2 Score: 70.8626 bits (172), Expect = 1.056e-11
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = -1
Query:  355 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKE-CVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 678
            +H  AS G    +K+ L  G + DE +  G TALH AC  G+      L++ GANV+  + N  T LH+AA       C+ LL+ NGA V +Q+ DGK+P+ +  ++ +
Sbjct:  210 LHAAASNGQINIVKHLLNLGVEIDEMNIYGNTALHIACYNGQDSVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLVNNGADVNIQSKDGKSPLHMTAVHGR 318          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR44_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Homo sapiens GN=ANKRD44 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 41/89 (46.07%), Postives = 54/89 (60.67%), Query Frame = -1
Query:  334 DSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 600
            D  GRTALH A   G V+   +LL  GAN++A DK    ALH+AA  G  + VALL+ +GA VT ++  G TP+  A  N Q +V+K L
Sbjct:  137 DRGGRTALHHAALNGHVEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTCKDKKGYTPLHAAASNGQINVVKHL 225          

HSP 2 Score: 70.4774 bits (171), Expect = 1.379e-11
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = -1
Query:  355 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKE-CVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 678
            +H  AS G    +K+ L  G + DE +  G TALH AC  G+      L++ GANV+  + N  T LH+AA       C+ LL+ NGA V +Q+ DGK+P+ +  ++ +
Sbjct:  210 LHAAASNGQINVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLVNNGADVNIQSKDGKSPLHMTAVHGR 318          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR26_MOUSE (Ankyrin repeat domain-containing protein 26 OS=Mus musculus GN=Ankrd26 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 55/172 (31.98%), Postives = 81/172 (47.09%), Query Frame = -1
Query:  292 VGNEDESIVHHTASVGDAEGLKNALAAG-ADKDEEDSEGRTALHFACGYG---------------------------------EVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVA-KLNSQHDVLKLLEKDAFL*NIGLLGS 702
            + ++D   +H  ASVGD   +++ L  G +  ++ D + RTALH AC YG                                 E +CA ILL+ GA+ + +D + NTALHYA         A LL + A +  +N D  TP+ +A K N QH V  L++K A +  +  LGS
Sbjct:   43 IHDKDMGKIHKAASVGDVAKVQHILILGKSGVNDRDKKDRTALHLACAYGHPEVVTLLVERKCEIDARDSESSTALIKAVQCQEEECAAILLDHGADPNVMDSSGNTALHYAVYSENTSMAAKLLAHNANIEAKNKDDLTPMLLAVKENKQHIVEFLVKKKASIHAVDQLGS 214          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR12_HUMAN (Ankyrin repeat domain-containing protein 12 OS=Homo sapiens GN=ANKRD12 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 4.288e-13
Identity = 44/135 (32.59%), Postives = 71/135 (52.59%), Query Frame = -1
Query:  340 TTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLK 744
            T S+ +   D+  +     E+ +H  A  GD + +K  ++ GA+ + +D  G T LH AC  G    A+IL+ AGA+V+    + +T LH +A  G ++ V LLL +G      N  G+ P+DVA+      +LK
Sbjct:  167 TPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLK 301          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: LCTA_LATTR (Alpha-latrocrustotoxin-Lt1a (Fragment) OS=Latrodectus tredecimguttatus PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.314e-13
Identity = 42/124 (33.87%), Postives = 71/124 (57.26%), Query Frame = -1
Query:  310 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLK-LLEKDAFL*N 678
            +H  A+ G+++ +K  L +GA  D+E + G TALH A      +  Q L+  GAN++A   + +T LH+AA  G+     LL++ GA +  +N+  + PI  A +N    ++K L+E+D+ L N
Sbjct:  738 LHLAAATGNSQIVKTILNSGAVVDQETANGFTALHLAIMNPNTETPQFLIAKGANINAKTNDGSTPLHFAAALGKTNIFQLLMDKGANIKAENLINQMPIHEAVVNGHLAIVKMLIEQDSSLMN 861          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR11_HUMAN (Ankyrin repeat domain-containing protein 11 OS=Homo sapiens GN=ANKRD11 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.314e-13
Identity = 51/142 (35.92%), Postives = 71/142 (50.00%), Query Frame = -1
Query:  319 TTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAF 744
            T ++ +   D+  +     E+ +H  A  GDA  +K  ++ GAD + +D  G TALH AC  G    A+ LL AGA V+    + +T LH AA  G  + V LLL  G      N  G+TP+ VA  NS   V  LL K  +
Sbjct:  150 TPNSASKTKDKVNKRNERGETRLHRAAIRGDARRIKELISEGADVNVKDFAGWTALHEACNRGYYDVAKQLLAAGAEVNTKGLDDDTPLHDAANNGHYKVVKLLLRYGGNPQQSNRKGETPLKVA--NSPTMVNLLLGKGTY 289          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: AR26L_HUMAN (Ankyrin repeat domain-containing protein 26-like protein OS=Homo sapiens PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.248e-12
Identity = 46/142 (32.39%), Postives = 68/142 (47.89%), Query Frame = -1
Query:  334 GGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAG-ADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 756
            G D   S D+  A     +  +    +H  AS G+   ++  L++G AD DE D + RTALH AC  G  +   +L++ G  +D  D    TAL  A     +EC  +LLE+GA   L ++ G T +  A  N    + K L
Sbjct:   27 GDDVAESDDSPFAQCGYNIQEKHLGKLHRAASRGEVSKVECILSSGSADLDERDKKKRTALHLACANGHPEVVALLVDRGCQLDVFDNKNRTALLKAVQCQEEECATILLEHGADPDLPDVYGNTTLHYAIYNEDIPMTKKL 168          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR44_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Mus musculus GN=Ankrd44 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.248e-12
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = -1
Query:  334 DSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 600
            D  GRTALH A   G ++   +LL  GAN++A DK    ALH+AA  G  + VALL+ +GA VT ++  G TP+  A  N Q  V+K L
Sbjct:  137 DRGGRTALHHAALNGHMEMVNLLLAKGANINAFDKKDRRALHWAAYMGHLDVVALLINHGAEVTCKDKKGYTPLHAAASNGQISVVKHL 225          

HSP 2 Score: 68.5514 bits (166), Expect = 5.241e-11
Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = -1
Query:  355 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKE-CVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 678
            +H  AS G    +K+ L  G + DE +  G TALH AC  G+      L++ GANV+  + +  T LH+AA       C+ LL+ NGA V +Q+ DGK+P+ +  ++ +
Sbjct:  210 LHAAASNGQISVVKHLLNLGVEIDEINVYGNTALHIACYNGQDAVVNELIDYGANVNQPNNSGFTPLHFAAASTHGALCLELLVNNGADVNIQSKDGKSPLHMTAVHGR 318          
The following BLAST results are available for this feature:
BLAST of CF838698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
RAI14_MOUSE1.925e-1332.30Ankycorbin OS=Mus musculus GN=Rai14 PE=1 SV=1[more]
NOTC4_MOUSE2.514e-1343.27Neurogenic locus notch homolog protein 4 OS=Mus mu... [more]
ANR44_CHICK2.514e-1346.07Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR44_HUMAN4.288e-1346.07Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR26_MOUSE4.288e-1331.98Ankyrin repeat domain-containing protein 26 OS=Mus... [more]
ANR12_HUMAN4.288e-1332.59Ankyrin repeat domain-containing protein 12 OS=Hom... [more]
LCTA_LATTR7.314e-1333.87Alpha-latrocrustotoxin-Lt1a (Fragment) OS=Latrodec... [more]
ANR11_HUMAN7.314e-1335.92Ankyrin repeat domain-containing protein 11 OS=Hom... [more]
AR26L_HUMAN1.248e-1232.39Ankyrin repeat domain-containing protein 26-like p... [more]
ANR44_MOUSE1.248e-1244.94Serine/threonine-protein phosphatase 6 regulatory ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06F10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838698 ID=CF838698; Name=CF838698; organism=Citrus sinensis; type=EST; length=852bp
TTTTTTTAACCATTGCATATTTGACATAATGAAGCAATAATTTGTAAAAG
GACACAAATGTATCATAACTGTAATTAAAGAAACTAAGACATTAACATTC
CCCACAGATAACTCATTCTGGGGAAGAGATTGTTTATGATATAAAATTTT
AATGGTAGCAATCAGACAGTAACAAACAGAGCATTGACAAAAGCATCAAG
TCGTGATGACAACCTAATGCCTAACCGGAGTAGATTCATCCAACACACTG
AAATGCCTATAAAATTGCCGAAATCCACCATTCAGATGCTGACTTCCCAA
CAATCCTATATTTTACAGGAAAGCATCCTTCTCCAAAAGCTTTAGCACAT
CATGTTGGCTATTGAGCTTGGCAACATCTATGGGAGTCTTGCCATCCATG
TTCTGCAGAGTTACAGCAGCACCGTTCTCCAACAGAAGGGCTACACATTC
CTTCCTGCCATATCCGGCTGCATAATGTAGGGCAGTGTTCTTGTTCTTAT
CCAAGGCATCCACATTTGCTCCGGCCTCAAGTAGGATTTGAGCACACTTC
ACCTCACCATATCCGCAGGCAAAATGCAATGCTGTCCTTCCTTCTGAATC
TTCCTCATCTTTATCAGCACCAGCTGCCAATGCATTTTTCAAACCCTCAG
CATCACCAACACTGGCAGTGTGATGAACAATTGACTCATCCTCATTTCCC
ACTTCTTCTGCTTCATCTGCCCCCGCATTATCAGCAGAAGTGGTCGCATC
CCCACCAACTGCAAGACCCATTGCTTCACCCAATTTCTGCAAAACATCTT
TATCATTCCAGTACTTCATCATAGCAGATGGTCCACCAGACTCTATCTCA
TC
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