CF838698

Overview
NameCF838698
Unique NameCF838698
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANKR6_MOUSE (Ankyrin repeat domain-containing protein 6 OS=Mus musculus GN=Ankrd6 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.248e-12
Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = -1
Query:  334 DESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 690
            D++ +H    VG+ E L   +  G   D +D +G TALH A  +G  + A++L++AGANV A +K  NTALH A      +   +LL  G+   L+N  G T + VA   +   V++LL
Sbjct:   75 DQTALHRATVVGNTEILTALIREGCALDRQDKDGNTALHEAAWHGFSQSAKLLVKAGANVLARNKAGNTALHLACQNSHSQSTRILLLGGSRADLKNNAGDTCLHVAARYNHLSVVRLL 193          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: UACA_HUMAN (Uveal autoantigen with coiled-coil domains and ankyrin repeats OS=Homo sapiens GN=UACA PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.629e-12
Identity = 43/120 (35.83%), Postives = 61/120 (50.83%), Query Frame = -1
Query:  334 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 693
            E  S+ H   S G+ E L   L  G D    D+ GR ALH A  YG   C Q LL+     +  D    TALH AA       + LL ++GA+V  +++DG+TP+ +A   S+  + +LL
Sbjct:   67 EGRSVFHVVTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLL 186          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: RIPK4_HUMAN (Receptor-interacting serine/threonine-protein kinase 4 OS=Homo sapiens GN=RIPK4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.128e-12
Identity = 43/123 (34.96%), Postives = 64/123 (52.03%), Query Frame = -1
Query:  334 NEDE-SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLEN-GAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 696
            +ED+ + +H  A  GD    +  L   A  +E D EGRT +H AC +G+    +ILL  G +V    K+    LHYAA  G    V LL +  G +V  Q +DG+TP+ +A     + V ++L
Sbjct:  549 DEDQWTALHFAAQNGDESSTRLLLEKNASVNEVDFEGRTPMHVACQHGQENIVRILLRRGVDVSLQGKDAWLPLHYAAWQGHLPIVKLLAKQPGVSVNAQTLDGRTPLHLAAQRGHYRVARIL 671          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: RAI14_HUMAN (Ankycorbin OS=Homo sapiens GN=RAI14 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12
Identity = 47/161 (29.19%), Postives = 79/161 (49.07%), Query Frame = -1
Query:  334 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDE--SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 810
            WN  D   +L +A+     GDA   A   G   A    ++ E  +  H  A+ G  E L+  +  G D   +D+ G +ALH A      +C + LL++    +++D +  TALHYAA  G  + V +L E+ + + L+++DG  P+ +A  N   ++   L
Sbjct:   16 WNKND--DRLLQAVE---NGDAEKVASLLGKKGASATKHDSEGKTAFHLAAAKGHVECLRVMITHGVDVTAQDTTGHSALHLAAKNSHHECIRKLLQSKCPAESVDSSGKTALHYAAAQGCLQAVQILCEHKSPINLKDLDGNIPLLLAVQNGHSEICHFL 171          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR52_CHICK (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Gallus gallus GN=ANKRD52 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.779e-12
Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = -1
Query:  355 SIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA-GYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 684
            +++H  A+ G  E +++ L  G + DE +S G TALH AC  G+   A  L+  GANV+  ++   T LH+AA       C+ LL+ NGA V  Q+ +GK+P+ +A ++ +
Sbjct:  208 TLLHTAAASGQIEVVRHLLRLGVEIDEPNSFGNTALHIACYMGQDAVANELVNYGANVNQPNEKGFTPLHFAAVSTNGALCLELLVNNGADVNFQSKEGKSPLHMAAIHGR 318          

HSP 2 Score: 68.9366 bits (167), Expect = 4.013e-11
Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = -1
Query:  334 VHHTASVGDAEGLKNALAAG--AD-KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 678
            +H  A+ G+ + L   + +G  AD  D  D  G+T L  A   G V C  +LLE G+  DA DK   TALH  A  G ++C+A LL++ A V  ++  G+TPI  A      ++L+ L
Sbjct:  655 LHAAAANGNTDSLHLLIDSGERADITDVMDIHGQTPLMLAIMNGHVDCVHLLLEKGSTADAADKRGRTALHRGAVTGCEDCLAALLDHDAFVLCRDFKGRTPIHFASACGHLEILRTL 772          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: UACA_BOVIN (Uveal autoantigen with coiled-coil domains and ankyrin repeats protein OS=Bos taurus GN=UACA PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 43/120 (35.83%), Postives = 61/120 (50.83%), Query Frame = -1
Query:  334 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 693
            E  S  H  AS G+ E L   L  G D    D+ GR ALH A  YG   C Q LL+     + +D    TALH AA       + LL ++GA+V  +++DG+TP+ +A    +  + +LL
Sbjct:   54 EGRSAFHVVASKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHVDLQGRTALHDAAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMCRPTICQLL 173          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR52_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Mus musculus GN=Ankrd52 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 42/110 (38.18%), Postives = 64/110 (58.18%), Query Frame = -1
Query:  355 IVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA-GYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 681
            ++H  A+ G  E +K+ L  GA+ DE ++ G TALH AC  G+   A  L+ AGANV+  +    T LH AA       C+ LL+ NGA V  Q+ +GK+P+ +A ++ +
Sbjct:  209 LLHTAAASGQIEVVKHLLRMGAEIDEPNAFGNTALHIACYLGQDAVAIELVNAGANVNQPNDKGFTPLHVAAVSTNGALCLELLVNNGADVNYQSKEGKSPLHMAAIHGR 318          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR52_DANRE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C OS=Danio rerio GN=ankrd52 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = -1
Query:  379 KNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPI 639
            ++ L+AG D +  D+ GRT LH A   G ++C  +LL +GA+++  DK   T LHYAA  GR +CV +L+  GA V  ++  G TP+
Sbjct:  407 EHVLSAGFDINTPDNFGRTCLHAAASGGNIECLNLLLSSGADMNKKDKFGRTPLHYAAANGRYQCVVVLVGAGAEVNERDRSGCTPL 493          

HSP 2 Score: 72.4034 bits (176), Expect = 3.630e-12
Identity = 53/162 (32.72%), Postives = 76/162 (46.91%), Query Frame = -1
Query:  277 NEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGY-------------------GRKE---CVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAFL*NIGLLGSQHLNG 696
            N   + +H  AS G+ E L   L++GAD +++D  GRT LH+A   G  +C  +L+ AGA V+  D++  T LHY+A                     G KE   CV  LL+NGA   L N  G + +  A  +     L+LL +  F      LG +  NG
Sbjct:  421 NFGRTCLHAAASGGNIECLNLLLSSGADMNKKDKFGRTPLHYAAANGRYQCVVVLVGAGAEVNERDRSGCTPLHYSAASTAFCRTDRPHASTHQNQEDGEKESFLCVEHLLDNGADPCLCNTKGYSAVHYAAAHGNKQNLELLLEMCF----NTLGDKESNG 578          

HSP 3 Score: 69.707 bits (169), Expect = 2.353e-11
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = -1
Query:  271 GADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEKDAFL*NIGL-LGSQH-LNGGF 621
            GAD + +  EG++ LH A  +G    +QIL++ G  +D +D+  NT LH AA YG +  ++ L+ NGA    Q + G  P+ +A L    D  + L     L +I L +  +H L+ GF
Sbjct:  296 GADVNMQSKEGKSPLHMAAIHGRFTRSQILIQNGGEIDCVDRYGNTPLHVAAKYGHELLISTLMTNGADTARQGIHGMFPLHLAVLYGSSDCCRKLLSSGQLYSIVLSMSKEHVLSAGF 414          

HSP 4 Score: 69.3218 bits (168), Expect = 3.073e-11
Identity = 40/109 (36.70%), Postives = 62/109 (56.88%), Query Frame = -1
Query:  355 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAA-GYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 678
            +H  A+ G  + +K  L  GA+ DE ++ G TALH AC  G+   A  L+  GANV+  +    T LH AA       C+ LL+ NGA V +Q+ +GK+P+ +A ++ +
Sbjct:  210 LHAAAASGHVDVVKYLLRNGAEIDEPNAFGNTALHVACYTGQEAVANELVNRGANVNQPNHRGYTPLHLAAVSTNGALCLELLVNNGADVNMQSKEGKSPLHMAAIHGR 318          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: UACA_MOUSE (Uveal autoantigen with coiled-coil domains and ankyrin repeats OS=Mus musculus GN=Uaca PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = -1
Query:  334 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 693
            E  S  H  AS G+ E L   L  G D    DS GR ALH A  YG   C Q LL+     + +D    TALH A        + LL ++GA+V  +++DG+TP+ +A    +  + +LL
Sbjct:   69 EGRSAFHVVASKGNLECLNAILTHGIDVATRDSAGRNALHLAAKYGHALCLQKLLQYNCPTEHVDLQGRTALHDAVMADCPSSIQLLCDHGASVNAKDIDGRTPLVLATQMCRPTICQLL 188          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: NOTC4_HUMAN (Neurogenic locus notch homolog protein 4 OS=Homo sapiens GN=NOTCH4 PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 6.191e-12
Identity = 43/104 (41.35%), Postives = 57/104 (54.81%), Query Frame = -1
Query:  331 LKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLE 642
            ++  +AA AD    D  G+TALH+A      + A+ LL+AGA+ DA D  + T L  AA  G  E   LLL  GAA  L++  G  P DVA   +  D+L LLE
Sbjct: 1717 VEELIAAQADVGARDKWGKTALHWAAAVNNARAARSLLQAGADKDAQDNREQTPLFLAAREGAVEVAQLLLGLGAARELRDQAGLAPADVAHQRNHWDLLTLLE 1820          
The following BLAST results are available for this feature:
BLAST of CF838698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
ANKR6_MOUSE1.248e-1236.13Ankyrin repeat domain-containing protein 6 OS=Mus ... [more]
UACA_HUMAN1.629e-1235.83Uveal autoantigen with coiled-coil domains and ank... [more]
RIPK4_HUMAN2.128e-1234.96Receptor-interacting serine/threonine-protein kina... [more]
RAI14_HUMAN2.779e-1229.19Ankycorbin OS=Homo sapiens GN=RAI14 PE=1 SV=2[more]
ANR52_CHICK2.779e-1236.04Serine/threonine-protein phosphatase 6 regulatory ... [more]
UACA_BOVIN3.630e-1235.83Uveal autoantigen with coiled-coil domains and ank... [more]
ANR52_MOUSE3.630e-1238.18Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR52_DANRE3.630e-1241.38Serine/threonine-protein phosphatase 6 regulatory ... [more]
UACA_MOUSE4.741e-1235.83Uveal autoantigen with coiled-coil domains and ank... [more]
NOTC4_HUMAN6.191e-1241.35Neurogenic locus notch homolog protein 4 OS=Homo s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06F10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838698 ID=CF838698; Name=CF838698; organism=Citrus sinensis; type=EST; length=852bp
TTTTTTTAACCATTGCATATTTGACATAATGAAGCAATAATTTGTAAAAG
GACACAAATGTATCATAACTGTAATTAAAGAAACTAAGACATTAACATTC
CCCACAGATAACTCATTCTGGGGAAGAGATTGTTTATGATATAAAATTTT
AATGGTAGCAATCAGACAGTAACAAACAGAGCATTGACAAAAGCATCAAG
TCGTGATGACAACCTAATGCCTAACCGGAGTAGATTCATCCAACACACTG
AAATGCCTATAAAATTGCCGAAATCCACCATTCAGATGCTGACTTCCCAA
CAATCCTATATTTTACAGGAAAGCATCCTTCTCCAAAAGCTTTAGCACAT
CATGTTGGCTATTGAGCTTGGCAACATCTATGGGAGTCTTGCCATCCATG
TTCTGCAGAGTTACAGCAGCACCGTTCTCCAACAGAAGGGCTACACATTC
CTTCCTGCCATATCCGGCTGCATAATGTAGGGCAGTGTTCTTGTTCTTAT
CCAAGGCATCCACATTTGCTCCGGCCTCAAGTAGGATTTGAGCACACTTC
ACCTCACCATATCCGCAGGCAAAATGCAATGCTGTCCTTCCTTCTGAATC
TTCCTCATCTTTATCAGCACCAGCTGCCAATGCATTTTTCAAACCCTCAG
CATCACCAACACTGGCAGTGTGATGAACAATTGACTCATCCTCATTTCCC
ACTTCTTCTGCTTCATCTGCCCCCGCATTATCAGCAGAAGTGGTCGCATC
CCCACCAACTGCAAGACCCATTGCTTCACCCAATTTCTGCAAAACATCTT
TATCATTCCAGTACTTCATCATAGCAGATGGTCCACCAGACTCTATCTCA
TC
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