CF838698

Overview
NameCF838698
Unique NameCF838698
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: INVS_CHICK (Inversin OS=Gallus gallus GN=INVS PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 44/125 (35.20%), Postives = 65/125 (52.00%), Query Frame = -1
Query:  328 GNEDESIVHHTASVGDAEGLKNALAAGAD-KDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLLEK 699
            G+   S VH  A  GD   L   +A  ++ KD+ED  GRT L +      V CA+ LL+AGA+V+  D+++ TALH AA  G    + LLL        ++++G TP+ +   +     L LL K
Sbjct:   11 GSSLASEVHAAAVNGDKSTLLKLIAGNSELKDKEDQFGRTPLMYCVLADRVDCAEALLKAGADVNRADRSRRTALHLAAQKGNYRFMKLLLARRGNWMQKDLEGMTPLHLTTRHKSPKCLALLLK 135          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: EHMT1_HUMAN (Histone-lysine N-methyltransferase, H3 lysine-9 specific 5 OS=Homo sapiens GN=EHMT1 PE=1 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = -1
Query:  355 LKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 642
            +K  L+ G+D +  D+E    LH+A   G V  A+ILL A  ++ A++ + ++ LH AA   R +CV L L   + VTL+N +G+TP+  A LNSQ
Sbjct:  858 VKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ 953          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR46_PONAB (Ankyrin repeat domain-containing protein 46 OS=Pongo abelii GN=ANKRD46 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = -1
Query:  331 GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS-QHDVLKLLE 657
            GD    K  L +G D +  DS GRT LH A   G V   Q+L + GA++ A D   NTALH     G  + +  L+ NG  + + N  G TP+ +AK      DV++LLE
Sbjct:   23 GDFNYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLLHKFGADLLATDYQGNTALHLC---GHVDTIQFLVSNGLKIDICNHQGATPLVLAKRRGVNKDVIRLLE 129          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR46_HUMAN (Ankyrin repeat domain-containing protein 46 OS=Homo sapiens GN=ANKRD46 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = -1
Query:  331 GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS-QHDVLKLLE 657
            GD    K  L +G D +  DS GRT LH A   G V   Q+L + GA++ A D   NTALH     G  + +  L+ NG  + + N  G TP+ +AK      DV++LLE
Sbjct:   23 GDFNYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLLHKFGADLLATDYQGNTALHLC---GHVDTIQFLVSNGLKIDICNHQGATPLVLAKRRGVNKDVIRLLE 129          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR46_BOVIN (Ankyrin repeat domain-containing protein 46 OS=Bos taurus GN=ANKRD46 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 42/110 (38.18%), Postives = 57/110 (51.82%), Query Frame = -1
Query:  331 GDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNS-QHDVLKLLE 657
            GD    K  L +G D +  DS GRT LH A   G V   Q+L + GA++ A D   NTALH     G  + +  L+ NG  + + N  G TP+ +AK      DV++LLE
Sbjct:   23 GDFNYSKRLLESGFDPNIRDSRGRTGLHLAAARGNVDICQLLHKFGADLLATDYQGNTALHLC---GHVDTIQFLVSNGLKIDICNHQGATPLVLAKRRGVNKDVIRLLE 129          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ACBD6_BOVIN (Acyl-CoA-binding domain-containing protein 6 OS=Bos taurus GN=ACBD6 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.845e-11
Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = -1
Query:  373 WNDKDVLQKLGEAMGLAVGGDATTSADNAGADEAEEVGNEDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDV 810
            WN +   +K G+      GG   +S  +      E +  ED+ I  +          K       D + +D EGRT LH+AC  G  +   +LL+  A+++  D    TALHYAA     + V LLL++GA  TL++ DG  P +V
Sbjct:  125 WNPQSP-EKKGKEANTGFGGPVVSSLYHE-----EIIREEDKDIFDYCRENNIDHITKVIKTKNMDVNMKDEEGRTLLHWACDRGHKELVTVLLQYRADINCQDNEGQTALHYAAACEFLDIVELLLQSGADPTLRDQDGCLPEEV 264          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: CTTB2_NEONE (Cortactin-binding protein 2 OS=Neofelis nebulosa GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 40/120 (33.33%), Postives = 59/120 (49.17%), Query Frame = -1
Query:  334 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 693
            +  S ++  A  G  + ++  L AGA  +  D+ G T L  A   G  KC ++L+   AN++       T L+ A   G KEC+ LLLE G   +++  DG TP+  A      D LKLL
Sbjct:  740 DGHSALYSAAKNGHTDCVRLLLNAGAQVNAADTNGFTPLCAAAAQGHFKCVELLISYDANINHAADEGQTPLYLACKNGNKECIQLLLEAGTDRSVKTRDGWTPVHAAVDTGNVDSLKLL 859          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: CTTB2_HORSE (Cortactin-binding protein 2 OS=Equus caballus GN=CTTNBP2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 41/120 (34.17%), Postives = 58/120 (48.33%), Query Frame = -1
Query:  334 EDESIVHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 693
            +  S ++  A  G  + ++  L A A  D  D  G T L  A   G  KC Q+L+   AN++       T L+ A   G KEC+ LLLE G+  +++  DG TP+  A      D LKLL
Sbjct:  744 DGHSALYSAAKNGHTDCVRLLLNAEAQVDAADKNGFTPLCAAAAQGHFKCVQLLIAYDANINHAADGGQTPLYLACKNGNKECIKLLLEAGSDRSIKTRDGWTPVHAAVDTGNVDSLKLL 863          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR28_MOUSE (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Mus musculus GN=Ankrd28 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 41/115 (35.65%), Postives = 58/115 (50.43%), Query Frame = -1
Query:  334 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 678
            +HH A  G  E +K  L+ GA+ +  D + R A+H+A   G ++  ++L+  GA V   DK   T LH AA  G    V  LL+ G  +   N  G TP+ VA  N Q  V+  L
Sbjct:  144 LHHAAFSGHGEMVKLLLSRGANINAFDKKDRRAIHWAAYMGHIEVVKLLVSHGAEVTCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPNAYGNTPLHVACYNGQDVVVNEL 258          

HSP 2 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = -1
Query:  355 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKE-CVALLLENGAAVTLQNMDGKTPIDVAKLNSQ 678
            +H  AS G    +K  L  G D +E ++ G T LH AC  G+      L++ GANV+  ++   T LH+AA       C+ LL+ NGA V +++ DGKTP+ +  L+ +
Sbjct:  210 LHAAASSGMISVVKYLLDLGVDMNEPNAYGNTPLHVACYNGQDVVVNELIDCGANVNQKNEKGFTPLHFAAASTHGALCLELLVGNGADVNMKSKDGKTPLHMTALHGR 318          
BLAST of CF838698 vs. ExPASy Swiss-Prot
Match: ANR28_HUMAN (Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A OS=Homo sapiens GN=ANKRD28 PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 8.940e-11
Identity = 41/115 (35.65%), Postives = 58/115 (50.43%), Query Frame = -1
Query:  334 VHHTASVGDAEGLKNALAAGADKDEEDSEGRTALHFACGYGEVKCAQILLEAGANVDALDKNKNTALHYAAGYGRKECVALLLENGAAVTLQNMDGKTPIDVAKLNSQHDVLKLL 678
            +HH A  G  E +K  L+ GA+ +  D + R A+H+A   G ++  ++L+  GA V   DK   T LH AA  G    V  LL+ G  +   N  G TP+ VA  N Q  V+  L
Sbjct:  177 LHHAAFSGHGEMVKLLLSRGANINAFDKKDRRAIHWAAYMGHIEVVKLLVSHGAEVTCKDKKSYTPLHAAASSGMISVVKYLLDLGVDMNEPNAYGNTPLHVACYNGQDVVVNEL 291          
The following BLAST results are available for this feature:
BLAST of CF838698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
INVS_CHICK6.845e-1135.20Inversin OS=Gallus gallus GN=INVS PE=2 SV=2[more]
EHMT1_HUMAN6.845e-1139.58Histone-lysine N-methyltransferase, H3 lysine-9 sp... [more]
ANR46_PONAB6.845e-1138.18Ankyrin repeat domain-containing protein 46 OS=Pon... [more]
ANR46_HUMAN6.845e-1138.18Ankyrin repeat domain-containing protein 46 OS=Hom... [more]
ANR46_BOVIN6.845e-1138.18Ankyrin repeat domain-containing protein 46 OS=Bos... [more]
ACBD6_BOVIN6.845e-1131.51Acyl-CoA-binding domain-containing protein 6 OS=Bo... [more]
CTTB2_NEONE8.940e-1133.33Cortactin-binding protein 2 OS=Neofelis nebulosa G... [more]
CTTB2_HORSE8.940e-1134.17Cortactin-binding protein 2 OS=Equus caballus GN=C... [more]
ANR28_MOUSE8.940e-1135.65Serine/threonine-protein phosphatase 6 regulatory ... [more]
ANR28_HUMAN8.940e-1135.65Serine/threonine-protein phosphatase 6 regulatory ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06F10_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838698 ID=CF838698; Name=CF838698; organism=Citrus sinensis; type=EST; length=852bp
TTTTTTTAACCATTGCATATTTGACATAATGAAGCAATAATTTGTAAAAG
GACACAAATGTATCATAACTGTAATTAAAGAAACTAAGACATTAACATTC
CCCACAGATAACTCATTCTGGGGAAGAGATTGTTTATGATATAAAATTTT
AATGGTAGCAATCAGACAGTAACAAACAGAGCATTGACAAAAGCATCAAG
TCGTGATGACAACCTAATGCCTAACCGGAGTAGATTCATCCAACACACTG
AAATGCCTATAAAATTGCCGAAATCCACCATTCAGATGCTGACTTCCCAA
CAATCCTATATTTTACAGGAAAGCATCCTTCTCCAAAAGCTTTAGCACAT
CATGTTGGCTATTGAGCTTGGCAACATCTATGGGAGTCTTGCCATCCATG
TTCTGCAGAGTTACAGCAGCACCGTTCTCCAACAGAAGGGCTACACATTC
CTTCCTGCCATATCCGGCTGCATAATGTAGGGCAGTGTTCTTGTTCTTAT
CCAAGGCATCCACATTTGCTCCGGCCTCAAGTAGGATTTGAGCACACTTC
ACCTCACCATATCCGCAGGCAAAATGCAATGCTGTCCTTCCTTCTGAATC
TTCCTCATCTTTATCAGCACCAGCTGCCAATGCATTTTTCAAACCCTCAG
CATCACCAACACTGGCAGTGTGATGAACAATTGACTCATCCTCATTTCCC
ACTTCTTCTGCTTCATCTGCCCCCGCATTATCAGCAGAAGTGGTCGCATC
CCCACCAACTGCAAGACCCATTGCTTCACCCAATTTCTGCAAAACATCTT
TATCATTCCAGTACTTCATCATAGCAGATGGTCCACCAGACTCTATCTCA
TC
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