CF838702 | Citrus Genome Database

Overview


Name	CF838702
Unique Name	CF838702
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	741

Libraries


Library Name	Type
Washington Navel Orange Shoot Meristem cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF838702 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.080e-33
Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 139.813 bits (351), Expect = 1.478e-32
Identity = 69/76 (90.79%), Postives = 73/76 (96.05%), Query Frame = 1

Query:   64 MQIFAKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLQDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIF KTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL++GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 134.806 bits (338), Expect = 4.755e-31
Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 1

Query:  520 MHIFVKTLTGKTITLQVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 741
            M IFVKTLTGKTI L+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLR 74

[Close]

BLAST of CF838702 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.634e-31
Identity = 69/76 (90.79%), Postives = 71/76 (93.42%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 134.806 bits (338), Expect = 4.755e-31
Identity = 67/76 (88.16%), Postives = 71/76 (93.42%), Query Frame = 1

Query:   64 MQIFAKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLQDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIF KTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQL++GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 129.798 bits (325), Expect = 1.529e-29
Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 1

Query:  520 MHIFVKTLTGKTITLQVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 741
            M IFVKTLTG TI L+VE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLR 74

[Close]

BLAST of CF838702 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.096e-27
Identity = 60/76 (78.95%), Postives = 66/76 (86.84%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 519
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TL DYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 122.479 bits (306), Expect = 2.442e-27
Identity = 59/76 (77.63%), Postives = 66/76 (86.84%), Query Frame = 1

Query:   64 MQIFAKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLQDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIF KTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQL+D +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 117.472 bits (293), Expect = 7.855e-26
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 1

Query:  520 MHIFVKTLTGKTITLQVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 741
            M IFVKTLTGKTIT++ E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLR
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLR 74

[Close]

BLAST of CF838702 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.105e-27
Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 519
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ DYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 119.783 bits (299), Expect = 1.583e-26
Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 1

Query:   64 MQIFAKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLQDGRTLADYNIQKESTLHLVLRLRGG 291
            MQIF KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQL+D +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 114.775 bits (286), Expect = 5.092e-25
Identity = 54/74 (72.97%), Postives = 65/74 (87.84%), Query Frame = 1

Query:  520 MHIFVKTLTGKTITLQVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 741
            M IF+KTLTGKTIT + E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLR
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLR 74

[Close]

BLAST of CF838702 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.067e-26
Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 1

Query:   97 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLQDGRTLADYNIQKESTLHLVLRLR 285
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 2 Score: 119.398 bits (298), Expect = 2.067e-26
Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 1

Query:  325 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLR 513
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 3 Score: 119.398 bits (298), Expect = 2.067e-26
Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 1

Query:  553 TITLQVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 741
            TITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

[Close]

BLAST of CF838702 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.891e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  298 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 519
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 97.8265 bits (242), Expect = 6.441e-20
Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 1

Query:   70 IFAKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLQDGRTLADYNIQKESTLHLVLRLRGG 291
            I  KTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 93.9745 bits (232), Expect = 9.301e-19
Identity = 46/72 (63.89%), Postives = 56/72 (77.78%), Query Frame = 1

Query:  526 IFVKTLTGKTITLQVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 741
            I VKTLTGK I + +E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LR
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALR 74

[Close]

BLAST of CF838702 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.776e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  298 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 519
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 97.4413 bits (241), Expect = 8.412e-20
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 1

Query:   70 IFAKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLQDGRTLADYNIQKESTLHLVLRLRGG 291
            I  KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 45/72 (62.50%), Postives = 56/72 (77.78%), Query Frame = 1

Query:  526 IFVKTLTGKTITLQVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 741
            I VKTLTGK I + +E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LR
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALR 74

[Close]

BLAST of CF838702 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.776e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  298 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 519
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 97.4413 bits (241), Expect = 8.412e-20
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 1

Query:   70 IFAKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLQDGRTLADYNIQKESTLHLVLRLRGG 291
            I  KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 45/72 (62.50%), Postives = 56/72 (77.78%), Query Frame = 1

Query:  526 IFVKTLTGKTITLQVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 741
            I VKTLTGK I + +E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LR
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALR 74

[Close]

BLAST of CF838702 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.776e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  298 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 519
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 97.4413 bits (241), Expect = 8.412e-20
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 1

Query:   70 IFAKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLQDGRTLADYNIQKESTLHLVLRLRGG 291
            I  KTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 45/72 (62.50%), Postives = 56/72 (77.78%), Query Frame = 1

Query:  526 IFVKTLTGKTITLQVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 741
            I VKTLTGK I + +E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LR
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALR 74

[Close]

BLAST of CF838702 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.412e-20
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 1

Query:   64 MQIFAKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLQDGRTLADYNIQKESTLHLVLRLRGGMQI 300
            M I  KTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 2 Score: 97.0561 bits (240), Expect = 1.099e-19
Identity = 44/76 (57.89%), Postives = 58/76 (76.32%), Query Frame = 1

Query:  292 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLVDYNIQKESTLHLVLRLRGG 519
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T  DY +Q  S LHLVL LRGG
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGG 76

HSP 3 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 1

Query:  520 MHIFVKTLTGKTITLQVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 741
            M I VKTLTGK I + +E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LR
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALR 74

The following BLAST results are available for this feature:

BLAST of CF838702 vs. ExPASy Swiss-Prot

BLAST of CF838702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_LEIMA	5.080e-33	93.42	Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1	[more]
UBIQ_LEITA	1.634e-31	90.79	Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3...	[more]
UBIL_NPVOP	1.096e-27	78.95	Ubiquitin-like protein OS=Orgyia pseudotsugata mul...	[more]
UBIL_NPVAC	7.105e-27	75.00	Ubiquitin-like protein OS=Autographa californica n...	[more]
UBIQ_LUMTE	2.067e-26	93.65	Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ...	[more]
RUB1_DESAN	2.891e-20	64.86	NEDD8-like protein RUB1 OS=Deschampsia antarctica ...	[more]
RUB2_ORYSJ	3.776e-20	63.51	NEDD8-like protein RUB2 OS=Oryza sativa subsp. jap...	[more]
RUB1_ORYSJ	3.776e-20	63.51	NEDD8-like protein RUB1 OS=Oryza sativa subsp. jap...	[more]
RUB1_ARATH	3.776e-20	63.51	NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN...	[more]
NEDD8_DROME	8.412e-20	56.96	NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS03_06F14_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06F14, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF838702 ID=CF838702; Name=CF838702; organism=Citrus sinensis; type=EST; length=741bp
AAAAAAACCCTTAAAAAAGATATTTAGTTTAGATACCGAGGCTCCCAATC
TCAGCCTTCCAACATGCAGATCTTTGCGAAAACTTTGACCGGCAAGACCA
TCACTCTCGAGGTGGAGAGCTCCGACACGATCGACAACGTCAAGGCTAAG
ATCCAGGACAAGGAAGGGATTCCACCGGACCAGCAGCGGCTGATCTTCGC
CGGAAAGCAGCTCCAGGACGGGCGCACCTTGGCGGATTACAACATCCAGA
AGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGCGGCGGCATGCAGATC
TTCGTCAAGACTCTGACCGGGAAGACTATCACCCTGGAGGTGGAGAGCTC
CGACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGGATCC
CCCCGGACCAGCAGAGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGC
CGCACCCTGGTCGATTATAACATCCAGAAGGAATCCACGCTCCACCTTGT
GTTGCGCCTGAGGGGAGGAATGCACATCTTCGTCAAGACGTTGACCGGGA
AGACGATCACCCTGCAGGTGGAGAGCTCCGACACGATCGACAACGTGAAG
GCCAAGATCCAGGACAAAGAGGGGATTCCTCCGGACCAGCAGAGGCTCAT
CTTCGCCGGCAAGCAGCTCGAGGATGGCCGGACTCTCGCCGATTACAACA
TTCAAAAGGAGTCCACTCTCCACCTTGTCCTCCGTCTCCGT