CF838714

Overview
NameCF838714
Unique NameCF838714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CLONN (Adenine phosphoribosyltransferase OS=Clostridium novyi (strain NT) GN=apt PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.284e-34
Identity = 69/128 (53.91%), Postives = 94/128 (73.44%), Query Frame = 1
Query:   13 VERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 396
            VE  KDKN+ VV G EARGF+FG P+A A+GA FVP+RK  KLP E IS EY LEYG DV+++H  A++ G++  IVDDL+ATGGT+++ I ++E++G  VV    +IEL +LKGRE++G   +  LV
Sbjct:   41 VEHLKDKNVDVVVGPEARGFLFGTPVAYALGAAFVPVRKKGKLPCETISSEYDLEYGSDVLQIHKDAIKKGQKVAIVDDLLATGGTMNSVIEMIEKLGGEVVSVDFLIELTDLKGREKIGNYDIMSLV 168          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_MANSM (Adenine phosphoribosyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=apt PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.307e-34
Identity = 75/134 (55.97%), Postives = 98/134 (73.13%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER---LGEKPLFVLVS 399
            L V  YK++ I+ V G E+RGFIFG P+ALA+G  FV +RKP+KLP E IS+ Y LEYG+D +EMHV +V+AG+  LI+DDL+ATGGT+ A I+L++R+G  V   A VI LPEL G ER   LG +P F LV+
Sbjct:   44 LIVGNYKNQGITKVVGTESRGFIFGAPVALALGLPFVLVRKPRKLPRETISQSYQLEYGEDTLEMHVDSVKAGDNVLIIDDLLATGGTVDATIKLIKRLGGDVKHAAFVINLPELGGEERLRSLGVEP-FTLVN 176          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_ENTS8 (Adenine phosphoribosyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=apt PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.307e-34
Identity = 66/124 (53.23%), Postives = 93/124 (75.00%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 378
            L VERYK+  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L ++ G ERL ++
Sbjct:   47 LLVERYKNAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVTDAAFIINLFDIGGEERLNKQ 170          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CLOBB (Adenine phosphoribosyltransferase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=apt PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.307e-34
Identity = 68/123 (55.28%), Postives = 91/123 (73.98%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 375
            +FVE  KDKN+ ++ G EARGFIFG P+A A+GA FVP+RKP KLPGE IS  Y LEYG D +++H  +++ G+R  IVDDL+ATGGT+    +L+E  G  VV  A +IEL +LKGR++LG+
Sbjct:   39 MFVEYLKDKNVDLIVGPEARGFIFGVPVAYALGAGFVPVRKPGKLPGETISVNYDLEYGSDSLQIHKDSIKKGQRVAIVDDLLATGGTVEGVAKLVEEAGGEVVSLAFLIELIDLKGRDKLGD 161          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_HAEIN (Adenine phosphoribosyltransferase OS=Haemophilus influenzae GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34
Identity = 69/121 (57.02%), Postives = 90/121 (74.38%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G +RL
Sbjct:   44 LIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_HAEIG (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittGG) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34
Identity = 69/121 (57.02%), Postives = 90/121 (74.38%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G +RL
Sbjct:   44 LIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_HAEIE (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittEE) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34
Identity = 69/121 (57.02%), Postives = 90/121 (74.38%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G +RL
Sbjct:   44 LIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGTVKHAAFVINLPELGGEKRL 164          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_HAEI8 (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=apt PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.543e-34
Identity = 69/121 (57.02%), Postives = 90/121 (74.38%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VE+Y+DK I+ V G E+RGFIFG P+ALA+G  F  +RKPKKLP E IS+ Y LEYG+D +EMHV A+  G+  LI+DDL+ATGGT+ A ++L++R+G  V   A VI LPEL G +RL
Sbjct:   44 LIVEQYRDKGITKVLGTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVINLPELGGEKRL 164          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SHEPA (Adenine phosphoribosyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=apt PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.628e-33
Identity = 67/121 (55.37%), Postives = 89/121 (73.55%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VE YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+ A ++ L++DDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G ERL
Sbjct:   47 LLVEHYKDQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINADDKVLVIDDLLATGGTIEATVKLIRKLGGSVNDAAFVISLPDLGGEERL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_HERA2 (Adenine phosphoribosyltransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=apt PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.126e-33
Identity = 67/129 (51.94%), Postives = 94/129 (72.87%), Query Frame = 1
Query:   10 FVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 396
            F +RY ++ +  + GIE+RGFIFG P+AL +G  FVP+RKP KLP + I  +YSLEYG + +E+H  A+QAG+R ++VDDL+ATGGT+ AA  LL ++G  VVE A +IEL  L GRE+LG +P +  +
Sbjct:   42 FAQRYANQQLQAIVGIESRGFIFGAPLALRLGIGFVPIRKPGKLPAQTIGVDYSLEYGTNRLEIHNDALQAGDRVVVVDDLLATGGTVVAACDLLNQLGAEVVEAAFLIELTFLGGREKLGNRPFYAQI 170          
The following BLAST results are available for this feature:
BLAST of CF838714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_CLONN4.284e-3453.91Adenine phosphoribosyltransferase OS=Clostridium n... [more]
APT_MANSM7.307e-3455.97Adenine phosphoribosyltransferase OS=Mannheimia su... [more]
APT_ENTS87.307e-3453.23Adenine phosphoribosyltransferase OS=Enterobacter ... [more]
APT_CLOBB7.307e-3455.28Adenine phosphoribosyltransferase OS=Clostridium b... [more]
APT_HAEIN9.543e-3457.02Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEIG9.543e-3457.02Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEIE9.543e-3457.02Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEI89.543e-3457.02Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_SHEPA1.628e-3355.37Adenine phosphoribosyltransferase OS=Shewanella pe... [more]
APT_HERA22.126e-3351.94Adenine phosphoribosyltransferase OS=Herpetosiphon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06G03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838714 ID=CF838714; Name=CF838714; organism=Citrus sinensis; type=EST; length=715bp
CCGTATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCCGTTGTTGC
AGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTA
TTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAG
GTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGAT
GCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATC
TAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGA
GTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCT
AAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCT
AAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCATATGG
GTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCA
TCTGGTAATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAGACGT
TGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGGGTTT
AAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCTGTAT
TTGATGCTTTTCAAATTATCTGGAGATTCTATCTGATGGTTGTTGATGTA
AAAAAAAAAAAAAAA
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