CF838714

Overview
NameCF838714
Unique NameCF838714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_YERPA (Adenine phosphoribosyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33
Identity = 65/124 (52.42%), Postives = 88/124 (70.97%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 378
            L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   51 LLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_YERP3 (Adenine phosphoribosyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33
Identity = 65/124 (52.42%), Postives = 88/124 (70.97%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 378
            L  E Y +  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP E ISE Y LEYG D +E+H  ++Q G++ L+VDDL+ATGGT+ A ++L+ R+G  VV  A +I LPEL G  RL ++
Sbjct:   51 LLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQ 174          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SHEHH (Adenine phosphoribosyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 399
            L VE YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+ A ++ L++DDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G +RL EK    LVS
Sbjct:   47 LLVEHYKDQGFTKVVGTEARGFLFGAPLALELGIGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINAEDKVLVIDDLLATGGTIEATVKLIRQLGGSVNDAAFVISLPDLGGEQRL-EKMDLKLVS 176          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_KLEP7 (Adenine phosphoribosyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=apt PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.626e-33
Identity = 66/121 (54.55%), Postives = 90/121 (74.38%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L  ERYKD  I+ V G EARGF+FG P+ALA+G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   47 LLTERYKDAGITKVVGTEARGFLFGAPVALALGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIDATVKLIRRLGGEVHDAAFIINLFDLGGEQRL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CLOPS (Adenine phosphoribosyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=apt PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.736e-33
Identity = 68/118 (57.63%), Postives = 87/118 (73.73%), Query Frame = 1
Query:   16 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            E +KDKNI VV G EARGFIFG P+A A+G  F+P+RKP KLPG+ +  EY LEYGKD +E+H  A++ G R  IVDDL+ATGGT++A  +L+E+ G  V   A  IEL ELKGR++L
Sbjct:   42 EFFKDKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDKL 159          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CLOPE (Adenine phosphoribosyltransferase OS=Clostridium perfringens GN=apt PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.736e-33
Identity = 68/118 (57.63%), Postives = 87/118 (73.73%), Query Frame = 1
Query:   16 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            E +KDKNI VV G EARGFIFG P+A A+G  F+P+RKP KLPG+ +  EY LEYGKD +E+H  A++ G R  IVDDL+ATGGT++A  +L+E+ G  V   A  IEL ELKGR++L
Sbjct:   42 EFFKDKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDKL 159          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CLOP1 (Adenine phosphoribosyltransferase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=apt PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.736e-33
Identity = 68/118 (57.63%), Postives = 87/118 (73.73%), Query Frame = 1
Query:   16 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            E +KDKNI VV G EARGFIFG P+A A+G  F+P+RKP KLPG+ +  EY LEYGKD +E+H  A++ G R  IVDDL+ATGGT++A  +L+E+ G  V   A  IEL ELKGR++L
Sbjct:   42 EFFKDKNIDVVVGPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLVEQAGGEVAGLAFTIELTELKGRDKL 159          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SHIFL (Adenine phosphoribosyltransferase OS=Shigella flexneri GN=apt PE=3 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.185e-33
Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   47 LLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISENYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SHIF8 (Adenine phosphoribosyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=apt PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.185e-33
Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   47 LLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISENYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SHISS (Adenine phosphoribosyltransferase OS=Shigella sonnei (strain Ss046) GN=apt PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.079e-33
Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG D +E+HV A++ G++ L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   47 LLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRL 167          
The following BLAST results are available for this feature:
BLAST of CF838714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_YERPA3.626e-3352.42Adenine phosphoribosyltransferase OS=Yersinia pest... [more]
APT_YERP33.626e-3352.42Adenine phosphoribosyltransferase OS=Yersinia pseu... [more]
APT_SHEHH3.626e-3354.20Adenine phosphoribosyltransferase OS=Shewanella ha... [more]
APT_KLEP73.626e-3354.55Adenine phosphoribosyltransferase OS=Klebsiella pn... [more]
APT_CLOPS4.736e-3357.63Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_CLOPE4.736e-3357.63Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_CLOP14.736e-3357.63Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_SHIFL6.185e-3354.55Adenine phosphoribosyltransferase OS=Shigella flex... [more]
APT_SHIF86.185e-3354.55Adenine phosphoribosyltransferase OS=Shigella flex... [more]
APT_SHISS8.079e-3354.55Adenine phosphoribosyltransferase OS=Shigella sonn... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06G03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838714 ID=CF838714; Name=CF838714; organism=Citrus sinensis; type=EST; length=715bp
CCGTATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCCGTTGTTGC
AGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTA
TTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAG
GTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGAT
GCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATC
TAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGA
GTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCT
AAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCT
AAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCATATGG
GTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCA
TCTGGTAATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAGACGT
TGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGGGTTT
AAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCTGTAT
TTGATGCTTTTCAAATTATCTGGAGATTCTATCTGATGGTTGTTGATGTA
AAAAAAAAAAAAAAA
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