CF838714

Overview
NameCF838714
Unique NameCF838714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CHLTE (Adenine phosphoribosyltransferase OS=Chlorobium tepidum GN=apt PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.632e-25
Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 1
Query:   34 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 378
            +   + GIE+RGFI G  +A  +G  FVP+RKP KLP +V+  EY LEYG D +EMH  A+  G+R L+VDDL+ATGGT  AA  L+E++G  V   A ++ LP++ G +++ EK
Sbjct:   50 DFDAIVGIESRGFILGGALAYTLGKGFVPVRKPGKLPADVVQLEYELEYGTDKIEMHTDALVQGQRVLLVDDLLATGGTALAAAGLVEKLGGVVASMAFIVNLPDIGGEKKIREK 164          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_BOVIN (Adenine phosphoribosyltransferase OS=Bos taurus GN=APRT PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.632e-25
Identity = 54/120 (45.00%), Postives = 82/120 (68.33%), Query Frame = 1
Query:   37 ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 396
            I  +AG+++RGF+FGP +A  +G   + +RK  KLPG  +   Y+LEYGK  +E+   A++ G++ ++VDDL+ATGGT+ AA  LL ++   V+EC  ++EL  LKGRE+LG  P F L+
Sbjct:   58 IDYIAGLDSRGFLFGPSLAQELGLGCILIRKRGKLPGPTVCASYALEYGKGELEIQRDALEPGQKVVVVDDLLATGGTMCAACELLGQLRAEVLECVSLVELTSLKGREKLGAVPFFSLL 177          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT1_YEAST (Adenine phosphoribosyltransferase 1 OS=Saccharomyces cerevisiae GN=APT1 PE=1 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.632e-25
Identity = 57/128 (44.53%), Postives = 85/128 (66.41%), Query Frame = 1
Query:   16 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 399
            E + +  I  + G+E+RGF+FGP +ALA+G  FVP+RK  KLPGE     Y  EYG D+ E+   A+ AG   +IVDD++ATGG+ +AA  L+E++  +++E   V+EL  LKGR +L   P+F L++
Sbjct:   53 EAFPEVKIDYIVGLESRGFLFGPTLALALGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKL-NAPVFTLLN 179          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SYNPW (Adenine phosphoribosyltransferase OS=Synechococcus sp. (strain WH7803) GN=apt PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25
Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 1
Query:   43 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 375
            ++ GIE+RGFI G  +A  +G  FVP+RKP KLPGEVI  +Y+LEYG D +E+H  A+    + L+VDDL+ATGGT SA+  L+ + G  +V C  VIEL +L GR +L E
Sbjct:   51 LIVGIESRGFIVGTALATQLGKGFVPVRKPGKLPGEVIGIDYTLEYGSDRLEIHADALSDHPKVLLVDDLLATGGTASASAELVTKAGGELVGCGFVIELADLAGRAKLPE 161          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_LEUCK (Adenine phosphoribosyltransferase OS=Leuconostoc citreum (strain KM20) GN=apt PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25
Identity = 58/116 (50.00%), Postives = 83/116 (71.55%), Query Frame = 1
Query:   25 KDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYG-KDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            KD N+ ++AG E+RGFI G P+A A+   FVP RK  KLP   +S  YSLEYG ++V+E+H  A++ G+R LIVDDL+ATGGT++A   ++E++G  V   A +IEL +L GRE++
Sbjct:   47 KDLNVDLIAGPESRGFIVGSPLAYALNIGFVPARKGGKLPRAAVSAAYSLEYGGENVLEIHQDAIKPGQRVLIVDDLLATGGTINATREIIEKLGGIVAGVAFIIELTDLHGREKI 162          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CLOCE (Adenine phosphoribosyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=apt PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25
Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 1
Query:   34 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            +  ++ G E+RGFIFG P+A  +   FVP+RK  KLP + + EEY LEYGKD +E+H  A+  GE+ LIVDDL+ATGGT  A I+L+E++G  V      IEL  LKGR++L
Sbjct:   49 DFDLIVGSESRGFIFGAPLAYRMEKGFVPVRKKGKLPYKTVREEYDLEYGKDELEIHSDAIAPGEKVLIVDDLLATGGTTEANIKLVEKLGGEVTGIVYFIELMSLKGRDKL 160          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_BACFN (Adenine phosphoribosyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=apt PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25
Identity = 56/119 (47.06%), Postives = 79/119 (66.39%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE 363
            +  E YKDK I+ V GIE+RGFI GP +A  +GA F+P+RKP KLP E + E Y  EYGKD +++H  A+   +  L+ DDL+ATGGT+ AA  L++++    V    +IEL EL G++
Sbjct:   44 IMYEMYKDKGITKVVGIESRGFIMGPILATRLGAGFIPIRKPGKLPAETMEESYDKEYGKDTVQIHKDALNENDVVLLHDDLLATGGTMKAACNLVKKLHPKKVYVNFIIELKELNGKQ 162          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SORC5 (Adenine phosphoribosyltransferase OS=Sorangium cellulosum (strain So ce56) GN=apt PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.783e-25
Identity = 62/135 (45.93%), Postives = 84/135 (62.22%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-----PLFVLV 396
            L  +R+  +++ VV G+E+RGFIFG  ++  + A FVP+RKP KLP       Y+LEYG   +EMH G+++ G R LIVDDL+ATGGT SAA  L  + G  V   A V+EL  L GR  L E+     P+F +V
Sbjct:   60 LLAQRFVGEHVDVVVGVESRGFIFGGALSARLNASFVPVRKPGKLPAATDRVAYALEYGTAELEMHKGSIRPGARVLIVDDLLATGGTASAAAELARKQGGEVAGFAFVVELDFLGGRALLAERAGDAAPVFSIV 194          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_LACBA (Adenine phosphoribosyltransferase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=apt PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.783e-25
Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 1
Query:   25 KDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 396
            KDK++ +V G EARGFI G P+A  +G  F P RK  KLP E +   Y LEYG+  + +H  A++ G++ L+ DDL+ATGGT+ A I+L+E +G  VV  A +IEL +L GR++L    +F L+
Sbjct:   47 KDKDVEMVVGPEARGFIVGCPVAYEMGIGFAPARKEGKLPRETVKASYDLEYGQSALYLHKDAIKPGQKVLVTDDLLATGGTIGATIQLVEDLGGIVVGTAFLIELQDLHGRDKLKGYDIFSLM 170          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_GEOLS (Adenine phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=apt PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.783e-25
Identity = 56/130 (43.08%), Postives = 83/130 (63.85%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 396
            +   RY  + I  V G+EARGF+ G  +A  +GA  V +RKP KLP E  S+ Y LEYG D +E+H  A++ GE+ LI DDL+ATGGT++A + ++  +   +VEC  + EL  L GR++L E  ++ L+
Sbjct:   40 MIANRYIGQRIDKVVGVEARGFLIGAALAYRLGAGVVLVRKPGKLPSETFSKTYDLEYGTDTLEIHKDAIKPGEKILIADDLLATGGTMAAVVDMVTNMQGEIVECCFMTELTFLDGRKKLPEGKVYSLM 169          
The following BLAST results are available for this feature:
BLAST of CF838714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_CHLTE1.632e-2547.83Adenine phosphoribosyltransferase OS=Chlorobium te... [more]
APT_BOVIN1.632e-2545.00Adenine phosphoribosyltransferase OS=Bos taurus GN... [more]
APT1_YEAST1.632e-2544.53Adenine phosphoribosyltransferase 1 OS=Saccharomyc... [more]
APT_SYNPW2.131e-2551.35Adenine phosphoribosyltransferase OS=Synechococcus... [more]
APT_LEUCK2.131e-2550.00Adenine phosphoribosyltransferase OS=Leuconostoc c... [more]
APT_CLOCE2.131e-2550.89Adenine phosphoribosyltransferase OS=Clostridium c... [more]
APT_BACFN2.131e-2547.06Adenine phosphoribosyltransferase OS=Bacteroides f... [more]
APT_SORC52.783e-2545.93Adenine phosphoribosyltransferase OS=Sorangium cel... [more]
APT_LACBA2.783e-2545.97Adenine phosphoribosyltransferase OS=Lactobacillus... [more]
APT_GEOLS2.783e-2543.08Adenine phosphoribosyltransferase OS=Geobacter lov... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06G03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838714 ID=CF838714; Name=CF838714; organism=Citrus sinensis; type=EST; length=715bp
CCGTATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCCGTTGTTGC
AGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTA
TTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAG
GTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGAT
GCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATC
TAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGA
GTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCT
AAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCT
AAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCATATGG
GTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCA
TCTGGTAATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAGACGT
TGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGGGTTT
AAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCTGTAT
TTGATGCTTTTCAAATTATCTGGAGATTCTATCTGATGGTTGTTGATGTA
AAAAAAAAAAAAAAA
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