CF838714

Overview
NameCF838714
Unique NameCF838714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_PELPD (Adenine phosphoribosyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=apt PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.804e-24
Identity = 56/131 (42.75%), Postives = 82/131 (62.60%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 399
            L   RY  + +  V G+EARGFI G  +A  + A  V +RKP KLP E  S+ YSLEYG D +E+H  A++ GER LI DDL+ATGGT++A + ++  +   +V+C  + EL  L GR +L    ++ L++
Sbjct:   41 LIAHRYVGQRVDKVVGVEARGFIIGAALAYKLCAGVVLVRKPGKLPSETFSKTYSLEYGTDTLEIHRDAIKPGERVLIADDLLATGGTMAAVVDMVLSMRAEIVDCCFMTELNFLNGRSKLPAGKVYSLLN 171          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_COPPD (Adenine phosphoribosyltransferase OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=apt PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.804e-24
Identity = 58/132 (43.94%), Postives = 83/132 (62.88%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER---LGEKPLFVL 393
            L  E     N++ VA +EARGFI+G  +A  +G  F+P+RKP KLP EV+ +E+ LEYGKDV+++H  A   G+  LIVDD++ATGGT  AA  L+  +G  V     ++ L  + G ER   LG+K  ++L
Sbjct:   42 LMAEAVSSLNVTAVAAVEARGFIWGGTLAYRLGVGFIPIRKPGKLPFEVVEKEFELEYGKDVLQIHKDAAGPGDSILIVDDVLATGGTAQAAADLVNTLGADVAGFCFLLRLGTMDGYERLSKLGKKVFYLL 173          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_BACWK (Adenine phosphoribosyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=apt PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.804e-24
Identity = 60/127 (47.24%), Postives = 82/127 (64.57%), Query Frame = 1
Query:   13 VERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 393
            VE    ++I VV G EARGFI G P++ A+   F P+RK  KLP EVI+ +Y  EYG DV+ +H  A++ G+R LI DDL+ATGGT+ A I+L+E +G  V   A ++EL  L GR+ L    + VL
Sbjct:   41 VEYANKRDIDVVVGPEARGFIIGCPVSYALEVGFAPVRKLGKLPREVITVDYGKEYGTDVLTIHKDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGVVAGIAFLVELTYLDGRKMLDGYDVLVL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_ARTS2 (Adenine phosphoribosyltransferase OS=Arthrobacter sp. (strain FB24) GN=apt PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.804e-24
Identity = 60/119 (50.42%), Postives = 77/119 (64.71%), Query Frame = 1
Query:   13 VERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            VE +K +    VAG+EARGF+     A A     + +RK  KLP +VISE+Y+LEYG   +E+H   + AG R LI+DD++ATGGTL AA RL ER GVHV     V+EL EL+GR  L
Sbjct:   57 VEPFKGQ-FDAVAGVEARGFLLAAAAAYATDTGVITVRKAGKLPRKVISEDYALEYGTATLELHTADLPAGSRVLILDDVLATGGTLGAAARLFERCGVHVAGVGVVMELGELRGRSAL 174          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_XANC5 (Adenine phosphoribosyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=apt PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24
Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 1
Query:   37 ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER-LGEKPLFVLVS 399
            +  V GIEARGFI G  +A  +   FVP+RKP KLPG  + +EY+LEYG D +EMH  A+  G R LIVDD++ATGGTL AA+ L  ++ + VV  A ++EL  L+GR++   + PL   +S
Sbjct:   64 LDAVLGIEARGFILGAALARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAVLVELQVLQGRQKWANDVPLLATLS 185          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_XANAC (Adenine phosphoribosyltransferase OS=Xanthomonas axonopodis pv. citri GN=apt PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24
Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 1
Query:   37 ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRER-LGEKPLFVLVS 399
            +  V GIEARGFI G  +A  +   FVP+RKP KLPG  + +EY+LEYG D +EMH  A+  G R LIVDD++ATGGTL AA+ L  ++ + VV  A ++EL  L+GR++   + PL   +S
Sbjct:   64 LDAVLGIEARGFILGAALARELRTGFVPVRKPGKLPGRTLIQEYALEYGTDRIEMHEDALPRGARVLIVDDVLATGGTLRAALGLAAQLELEVVGAAVLVELQGLQGRQKWANDVPLLATLS 185          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SYNS3 (Adenine phosphoribosyltransferase OS=Synechococcus sp. (strain CC9311) GN=apt PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24
Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 1
Query:   43 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            ++ GIEARGFI G  +A      FVP+RKP KLPG+V   +Y+LEYG D +E+H  A++   R L+VDDL+ATGGT SA   L+++ G  +V CA ++EL ELKGR RL
Sbjct:   51 LIVGIEARGFIVGMGLATHKKLGFVPVRKPGKLPGKVYGIDYALEYGTDRLEIHADAMRGQPRILVVDDLLATGGTASATADLVKQAGGQLVGCAFIVELTELKGRGRL 159          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_EXISA (Adenine phosphoribosyltransferase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=apt PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24
Identity = 55/124 (44.35%), Postives = 82/124 (66.13%), Query Frame = 1
Query:   25 KDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 396
            +++   ++AG EARGF+ G P A A+   FVP+RK  KLP E +   Y LEYG D++ MH  ++Q G++ +I+DDL+ATGGT+ A I+++E++G  V     +IEL  L GRERL    +F L+
Sbjct:   45 RERGAELIAGPEARGFVVGCPAAYALELGFVPVRKEGKLPRETVRVSYGLEYGTDILTMHKDSIQPGQQVVILDDLLATGGTIEATIKMIEQLGGVVAGIGFLIELDGLGGRERLEGYDVFSLI 168          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CLOPH (Adenine phosphoribosyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=apt PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24
Identity = 53/118 (44.92%), Postives = 79/118 (66.95%), Query Frame = 1
Query:   16 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            E     +  V+ G E+RGFIFG PIA  +   F+P+RK  KLP E +  EY+LEYG   +EMH  +++ G++ +I+DDL+ATGGT+ A  +L+E++G  VV+   ++EL  L GRE+L
Sbjct:   43 ENLNGLDFDVIVGPESRGFIFGVPIAYNLNKAFIPVRKKGKLPCETVEMEYALEYGTATIEMHKDSIKPGQKVVIIDDLIATGGTIEAITKLIEQLGGEVVKIVFLMELEGLMGREKL 160          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CLAMS (Adenine phosphoribosyltransferase OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=apt PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24
Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 1
Query:   37 ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 399
            +  VAG+EARGF+     A A G   + +RK  KLPGEV+ E Y+LEYG+  +E+H G +  G R L++DD++ATGGTL AA RLLER G  V     V+EL +L GR RL    +  ++S
Sbjct:   70 VDAVAGVEARGFLLAAAAAYASGVGTLAVRKAGKLPGEVLRETYALEYGEAAIELHPGQLAPGSRVLLLDDVLATGGTLEAAARLLERAGYEVAGIGVVLELADLGGRARLAGHDVHAILS 190          
The following BLAST results are available for this feature:
BLAST of CF838714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_PELPD1.804e-2442.75Adenine phosphoribosyltransferase OS=Pelobacter pr... [more]
APT_COPPD1.804e-2443.94Adenine phosphoribosyltransferase OS=Coprothermoba... [more]
APT_BACWK1.804e-2447.24Adenine phosphoribosyltransferase OS=Bacillus weih... [more]
APT_ARTS21.804e-2450.42Adenine phosphoribosyltransferase OS=Arthrobacter ... [more]
APT_XANC52.356e-2448.36Adenine phosphoribosyltransferase OS=Xanthomonas c... [more]
APT_XANAC2.356e-2448.36Adenine phosphoribosyltransferase OS=Xanthomonas a... [more]
APT_SYNS32.356e-2452.29Adenine phosphoribosyltransferase OS=Synechococcus... [more]
APT_EXISA2.356e-2444.35Adenine phosphoribosyltransferase OS=Exiguobacteri... [more]
APT_CLOPH2.356e-2444.92Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_CLAMS2.356e-2447.11Adenine phosphoribosyltransferase OS=Clavibacter m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06G03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838714 ID=CF838714; Name=CF838714; organism=Citrus sinensis; type=EST; length=715bp
CCGTATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCCGTTGTTGC
AGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTA
TTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAG
GTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGAT
GCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATC
TAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGA
GTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCT
AAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCT
AAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCATATGG
GTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCA
TCTGGTAATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAGACGT
TGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGGGTTT
AAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCTGTAT
TTGATGCTTTTCAAATTATCTGGAGATTCTATCTGATGGTTGTTGATGTA
AAAAAAAAAAAAAAA
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