CF838714

Overview
NameCF838714
Unique NameCF838714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_WOLSU (Adenine phosphoribosyltransferase OS=Wolinella succinogenes GN=apt PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.077e-24
Identity = 58/130 (44.62%), Postives = 84/130 (64.62%), Query Frame = 1
Query:   16 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAV--QAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE-KPLFVLV 396
            +RY    +  VAGIE+RGFIFG  +A  +   FVP+RK  KLP   I+E+YSLEYG D +E+H+ A   + G R L++DDL+ATGGT  AA++L++    H VE   ++ L EL G +++    PL+ L+
Sbjct:   51 DRYARFELDYVAGIESRGFIFGAALAAKLEVGFVPIRKKGKLPSTTIAEKYSLEYGFDEVEIHIDAFREKEGSRVLLIDDLIATGGTAEAAVKLIQSAKGHCVEACFLLNLEELGGAKKVSNLAPLYTLL 180          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_THESQ (Adenine phosphoribosyltransferase OS=Thermotoga sp. (strain RQ2) GN=apt PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.077e-24
Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 1
Query:   28 DKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            DK   +V   EARGFI G  +A  +G  FVP+RKP KLP + + EEY LEYG + + +H  A++ G++ LIVDD++ATGGT  A IRL++++G  VV  A ++EL  L+ R+RL
Sbjct:   46 DKEFDLVVAPEARGFILGAAMAYKLGKGFVPVRKPGKLPYKTVYEEYQLEYGTEQLHIHEDAIEKGQKVLIVDDVLATGGTAEALIRLVKKLGGEVVSLAFLVELSYLEPRKRL 159          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_STRGB (Adenine phosphoribosyltransferase OS=Streptomyces galbus GN=apt PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.077e-24
Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 1
Query:   46 VAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            V G+EARGFI G P+A+  G  F+P+RK  KLPG  +S+ Y LEYG   +E+H   + AG+R LIVDD++ATGGT  AAI+L+ R G  V   A ++EL  L GR RL
Sbjct:   60 VVGLEARGFILGAPVAVRAGLGFIPVRKAGKLPGATLSQAYDLEYGSAEIEVHAEDLAAGDRVLIVDDVLATGGTAEAAIQLIRRAGAEVCGLAVLMELGFLGGRARL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_GLUDA (Adenine phosphoribosyltransferase OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=apt PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.077e-24
Identity = 54/119 (45.38%), Postives = 82/119 (68.91%), Query Frame = 1
Query:   43 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 399
            ++A IE+RGF+   P+A  +G   V +RKP KLPGE +S  Y LEYG D + +   A++ G+R +++DDL+ATGGTL+A++ LL +VG  VV  + ++EL  L GR+RL + P+  L+S
Sbjct:   56 MLAAIESRGFLTAAPLASNLGCGLVMLRKPGKLPGETVSHTYDLEYGSDTLHIQADAIRPGQRVVVMDDLLATGGTLAASVALLRKVGADVVGASVLVELRALGGRQRL-DVPVQALIS 173          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_BACV8 (Adenine phosphoribosyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=apt PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.077e-24
Identity = 57/120 (47.50%), Postives = 77/120 (64.17%), Query Frame = 1
Query:   16 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGE 375
            E YKDK I+ V GIE+RGFI G  +A  +GA FV  RKP KLP EV+ E Y+ EYG D +++H  A+   +  L+ DDL+ATGGT++A  RL++R G   +    +IEL  L GR+   E
Sbjct:   45 EMYKDKGITKVVGIESRGFIMGGALAARLGAGFVMARKPGKLPAEVVEETYAKEYGTDTIQIHKDAIDENDVVLLHDDLLATGGTMAATHRLVQRCGAKKIFINFIIELGGLNGRKAFPE 164          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SPHAL (Adenine phosphoribosyltransferase OS=Sphingopyxis alaskensis GN=apt PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24
Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 1
Query:   43 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLG 372
            ++  +EARGF+FG  +A A+G   VP+RK  KLPG  I  +Y LEYG D +E+H GAV  G R ++VDDL+ATGGT+ A   L+  VG  V     VI+LP+L G  RLG
Sbjct:   60 LIVAVEARGFLFGAAMATAMGLGVVPVRKAGKLPGVTIGVDYELEYGTDRLELHEGAVLPGHRVVLVDDLLATGGTILATAALMRSVGAEVAAALFVIDLPDLGGSARLG 169          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_RHOCS (Adenine phosphoribosyltransferase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=apt PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24
Identity = 56/119 (47.06%), Postives = 80/119 (67.23%), Query Frame = 1
Query:   43 VVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 399
            ++ GIE+RGF+   P++LA+G  F  +RK  KLPG+ I   Y LEYG D +E+   A+  G+R +++DDL+ATGGT++AAI LL  VG  V   A ++EL  L GR+RL + P  VL+S
Sbjct:   51 LLVGIESRGFLVAAPLSLALGCGFAMVRKKGKLPGQTIRYTYDLEYGTDTVEIQADAIAPGQRVVVLDDLLATGGTMAAAIHLLRSVGADVTAAAFIMELAFLNGRDRL-DVPAEVLIS 168          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_BIFLD (Adenine phosphoribosyltransferase OS=Bifidobacterium longum (strain DJO10A) GN=apt PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 1
Query:   46 VAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 399
            +AG+E+RGF+FGP +A  +G  F+ +RK  KLP E I E Y LEYG   +E+   AVQAG+R LIVDDL+ATGGT  AA  L+E+ G  VV  + V+ L  L G ++L  KP   L++
Sbjct:   73 IAGLESRGFLFGPAMAAHLGKGFIAVRKAGKLPPETIGESYDLEYGTASVEIETDAVQAGKRVLIVDDLIATGGTAKAATDLIEKAGGTVVGFSFVMRLDGLDGLDKLDGKPSSSLIA 190          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_ACIC1 (Adenine phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=apt PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.019e-24
Identity = 56/119 (47.06%), Postives = 76/119 (63.87%), Query Frame = 1
Query:   13 VERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            V  Y+   +  V GIEARGFI   P+A  +GA FVPMRK  KLP   +   Y+LEYG   +E+HV A + G+R L+VDD++ATGGT +AA+ L+++     V  + +IEL  L GR RL
Sbjct:   48 VRDYQHGTVDKVVGIEARGFIVAAPVAYHLGAGFVPMRKKGKLPYRTLETSYALEYGTATIEVHVDAFRPGDRVLVVDDVLATGGTAAAALELIDQASAKAVGLSFLIELSALGGRSRL 166          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SULNB (Adenine phosphoribosyltransferase OS=Sulfurovum sp. (strain NBC37-1) GN=apt PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.248e-24
Identity = 58/124 (46.77%), Postives = 81/124 (65.32%), Query Frame = 1
Query:   16 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHV------GAVQAGERA--LIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRE 363
            ERY   ++  +AGI+ARGFIFG  +A  +G  FVP+RK  KLP   ++E+YSLEYG D +E+H+      G    GER+  L++DDL+ATGGT  AA  L+++VG H VE   ++EL  L  +E
Sbjct:   50 ERYLGYDLDYIAGIDARGFIFGSILADRLGVGFVPVRKKGKLPYTTVAEKYSLEYGFDEVEIHIDAFGENGCCSTGERSKVLLIDDLIATGGTAKAAANLIDKVGAHCVEACFIMELGFLNSKE 173          
The following BLAST results are available for this feature:
BLAST of CF838714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_WOLSU3.077e-2444.62Adenine phosphoribosyltransferase OS=Wolinella suc... [more]
APT_THESQ3.077e-2448.25Adenine phosphoribosyltransferase OS=Thermotoga sp... [more]
APT_STRGB3.077e-2451.85Adenine phosphoribosyltransferase OS=Streptomyces ... [more]
APT_GLUDA3.077e-2445.38Adenine phosphoribosyltransferase OS=Gluconacetoba... [more]
APT_BACV83.077e-2447.50Adenine phosphoribosyltransferase OS=Bacteroides v... [more]
APT_SPHAL4.019e-2450.00Adenine phosphoribosyltransferase OS=Sphingopyxis ... [more]
APT_RHOCS4.019e-2447.06Adenine phosphoribosyltransferase OS=Rhodospirillu... [more]
APT_BIFLD4.019e-2449.15Adenine phosphoribosyltransferase OS=Bifidobacteri... [more]
APT_ACIC14.019e-2447.06Adenine phosphoribosyltransferase OS=Acidothermus ... [more]
APT_SULNB5.248e-2446.77Adenine phosphoribosyltransferase OS=Sulfurovum sp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06G03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838714 ID=CF838714; Name=CF838714; organism=Citrus sinensis; type=EST; length=715bp
CCGTATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCCGTTGTTGC
AGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTA
TTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAG
GTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGAT
GCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATC
TAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGA
GTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCT
AAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCT
AAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCATATGG
GTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCA
TCTGGTAATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAGACGT
TGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGGGTTT
AAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCTGTAT
TTGATGCTTTTCAAATTATCTGGAGATTCTATCTGATGGTTGTTGATGTA
AAAAAAAAAAAAAAA
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