CF838714

Overview
NameCF838714
Unique NameCF838714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SCHPO (Adenine phosphoribosyltransferase OS=Schizosaccharomyces pombe GN=apt1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.248e-24
Identity = 54/112 (48.21%), Postives = 76/112 (67.86%), Query Frame = 1
Query:   34 NISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            NI V+ G+EARGF+FGP +AL     FVP+RKP KLPG+++   Y+ EY  D   +  G ++ G+R LIVDD++ATGGT  AA  L+ R+G  +V    ++EL  L+GR+RL
Sbjct:   56 NIDVIVGLEARGFLFGPTLALRANCAFVPVRKPNKLPGDLVVVSYNKEYSTDSFAIQKGTIKPGQRVLIVDDILATGGTALAADELVTRLGGELVGHLFLLELTFLQGRKRL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_PEDPA (Adenine phosphoribosyltransferase OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=apt PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.248e-24
Identity = 54/115 (46.96%), Postives = 76/115 (66.09%), Query Frame = 1
Query:   25 KDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            +DK + ++ G EARGFI G P+A  +G  F P RK  KLP E +   Y LEYGK  + +   A++ G++ LI DDL+ATGGT++A I L+E++G  VV  A  IEL +L GRE++
Sbjct:   47 RDKGVEMIVGPEARGFIVGCPVAYEMGIGFAPARKKGKLPRETVKATYGLEYGKSELYLQKDAIKPGQKVLITDDLLATGGTIAATIELVEKLGGIVVGTAFFIELKDLNGREKI 161          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_DESAD (Adenine phosphoribosyltransferase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=apt PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.248e-24
Identity = 56/118 (47.46%), Postives = 73/118 (61.86%), Query Frame = 1
Query:   16 ERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            ER+ D  I  +A  EARGFIFG P+A  +   FVP+RKP KLP E IS  Y LEYG D + MHV AV   E  L++DD++ATGGT    ++L+E+ G  V     + EL  L G+ +L
Sbjct:   42 ERFADYKIDKIAAAEARGFIFGAPLATKLDIGFVPIRKPGKLPYETISVSYDLEYGTDNLSMHVDAVAKDENVLLIDDVLATGGTAEGMVKLVEKAGGKVSGMGFIAELTFLDGKSKL 159          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_BIFLO (Adenine phosphoribosyltransferase OS=Bifidobacterium longum GN=apt PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.248e-24
Identity = 58/118 (49.15%), Postives = 78/118 (66.10%), Query Frame = 1
Query:   46 VAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLVS 399
            +AG+E+RGF+FGP +A  +G  F+ +RK  KLP E I E Y LEYG   +E+   AVQAG+R LIVDDL+ATGGT  AA  L+E+ G  VV  + V+ L  L G ++L  KP   L++
Sbjct:   73 IAGLESRGFLFGPVMAAHLGKGFIAVRKAGKLPPETIGESYDLEYGTASVEIETDAVQAGKRVLIVDDLIATGGTAKAATDLIEKAGGTVVGFSFVMRLDGLDGLDKLDGKPSSSLIA 190          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_XANOR (Adenine phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae GN=apt PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 1
Query:   37 ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-PLFVLVS 399
            +  V GIEA GFI G  +A  +   FVP+RKP KLPG  +  EY+LEYG D +EMH GA+  G R LIVDD++ATGGTL AA+ L  ++ + +V  A ++EL  L+GR++  +  PL   +S
Sbjct:   64 LDAVLGIEALGFILGAALARELRTGFVPVRKPGKLPGRTLIREYALEYGTDRIEMHEGALPRGARVLIVDDVLATGGTLRAALGLAAQLELEIVGAAVLVELLALQGRQKWADDVPLLATLS 185          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_XANOP (Adenine phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=apt PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 1
Query:   37 ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-PLFVLVS 399
            +  V GIEA GFI G  +A  +   FVP+RKP KLPG  +  EY+LEYG D +EMH GA+  G R LIVDD++ATGGTL AA+ L  ++ + +V  A ++EL  L+GR++  +  PL   +S
Sbjct:   64 LDAVLGIEALGFILGAALARELRTGFVPVRKPGKLPGRTLIREYALEYGTDRIEMHEGALPRGARVLIVDDVLATGGTLRAALGLAAQLELEIVGAAVLVELLALQGRQKWADDVPLLATLS 185          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_XANOM (Adenine phosphoribosyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=apt PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 58/122 (47.54%), Postives = 80/122 (65.57%), Query Frame = 1
Query:   37 ISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK-PLFVLVS 399
            +  V GIEA GFI G  +A  +   FVP+RKP KLPG  +  EY+LEYG D +EMH GA+  G R LIVDD++ATGGTL AA+ L  ++ + +V  A ++EL  L+GR++  +  PL   +S
Sbjct:   64 LDAVLGIEALGFILGAALARELRTGFVPVRKPGKLPGRTLIREYALEYGTDRIEMHEGALPRGARVLIVDDVLATGGTLRAALGLAAQLELEIVGAAVLVELLALQGRQKWADDVPLLATLS 185          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_THEMA (Adenine phosphoribosyltransferase OS=Thermotoga maritima GN=apt PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 54/114 (47.37%), Postives = 78/114 (68.42%), Query Frame = 1
Query:   28 DKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            D+   +V   EARGFI G  +A  +G  FVP+RKP KLP + + EEY LEYG + + +H  A++ G++ LIVDD++ATGGT  A IRL++++G  VV  A ++EL  L+ R+RL
Sbjct:   49 DREFDLVVAPEARGFILGAAMAYKLGKGFVPVRKPGKLPYKTVYEEYQLEYGTEQLHIHEDAIEKGQKVLIVDDVLATGGTAEALIRLVKKLGGEVVSLAFLVELSYLEPRKRL 162          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_STRCO (Adenine phosphoribosyltransferase OS=Streptomyces coelicolor GN=apt PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 54/108 (50.00%), Postives = 72/108 (66.67%), Query Frame = 1
Query:   46 VAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            V G+EARGFI G P+AL  G  F+P+RK  KLPG  +S+ Y LEYG   +E+H   + AG+R L+VDD++ATGGT  A++ L+ R G  V   A ++EL  L GR RL
Sbjct:   60 VVGLEARGFILGAPVALRAGLGFIPVRKAGKLPGATLSQAYDLEYGSAEIEVHAEDLTAGDRVLVVDDVLATGGTAEASLELIRRAGAEVAGLAVLMELGFLGGRARL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CANAL (Adenine phosphoribosyltransferase OS=Candida albicans GN=APT1 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.855e-24
Identity = 55/122 (45.08%), Postives = 79/122 (64.75%), Query Frame = 1
Query:   28 DKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVL 393
            ++ I  V G+E+RGF+FGP +ALA+ A FVP+RKP KLPG     E+  EYG D  E+    +  G + LIVDD++ATGG+   A  L ++ G  +VE   V+EL  LKGR++L + P++ L
Sbjct:   58 EQKIDYVIGLESRGFLFGPTLALALNAGFVPVRKPGKLPGPTFKVEFQKEYGSDEFEIQQDVIPKGAKVLIVDDILATGGSAFGAGELAKKTGAEIVEYLFVMELDFLKGRDKL-DAPVYTL 178          
The following BLAST results are available for this feature:
BLAST of CF838714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SCHPO5.248e-2448.21Adenine phosphoribosyltransferase OS=Schizosacchar... [more]
APT_PEDPA5.248e-2446.96Adenine phosphoribosyltransferase OS=Pediococcus p... [more]
APT_DESAD5.248e-2447.46Adenine phosphoribosyltransferase OS=Desulfovibrio... [more]
APT_BIFLO5.248e-2449.15Adenine phosphoribosyltransferase OS=Bifidobacteri... [more]
APT_XANOR6.855e-2447.54Adenine phosphoribosyltransferase OS=Xanthomonas o... [more]
APT_XANOP6.855e-2447.54Adenine phosphoribosyltransferase OS=Xanthomonas o... [more]
APT_XANOM6.855e-2447.54Adenine phosphoribosyltransferase OS=Xanthomonas o... [more]
APT_THEMA6.855e-2447.37Adenine phosphoribosyltransferase OS=Thermotoga ma... [more]
APT_STRCO6.855e-2450.00Adenine phosphoribosyltransferase OS=Streptomyces ... [more]
APT_CANAL6.855e-2445.08Adenine phosphoribosyltransferase OS=Candida albic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06G03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838714 ID=CF838714; Name=CF838714; organism=Citrus sinensis; type=EST; length=715bp
CCGTATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCCGTTGTTGC
AGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTA
TTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAG
GTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGAT
GCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATC
TAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGA
GTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCT
AAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCT
AAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCATATGG
GTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCA
TCTGGTAATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAGACGT
TGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGGGTTT
AAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCTGTAT
TTGATGCTTTTCAAATTATCTGGAGATTCTATCTGATGGTTGTTGATGTA
AAAAAAAAAAAAAAA
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