CF838714

Overview
NameCF838714
Unique NameCF838714
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SALCH (Adenine phosphoribosyltransferase OS=Salmonella choleraesuis GN=apt PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32
Identity = 65/121 (53.72%), Postives = 89/121 (73.55%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   47 LLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SALA4 (Adenine phosphoribosyltransferase OS=Salmonella agona (strain SL483) GN=apt PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.378e-32
Identity = 65/121 (53.72%), Postives = 89/121 (73.55%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VERYK+  I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   47 LLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_YERE8 (Adenine phosphoribosyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=apt PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32
Identity = 62/124 (50.00%), Postives = 89/124 (71.77%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEK 378
            L  ERY DK ++ V G EARGF+FG P+AL++G  FVP+RKP KLP   ISE Y LEYG D +E+H  +++ G++ L++DDL+ATGGT+ A ++L+ ++G  V + A VI LP+L G  RL ++
Sbjct:   51 LLTERYLDKGVTKVVGTEARGFLFGAPVALSLGVGFVPVRKPGKLPRATISESYELEYGTDKLEIHTDSIKPGDKVLVIDDLLATGGTIEATVKLIRKLGGEVTDAAFVINLPDLGGEARLNDQ 174          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SALAR (Adenine phosphoribosyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=apt PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32
Identity = 65/121 (53.72%), Postives = 88/121 (72.73%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VERYK   I+ V G EARGF+FG P+AL +G  FVP+RKP+KLP E I+E Y LEYG D +E+HV A++ G+  L+VDDL+ATGGT+ A ++L+ R+G  V + A +I L +L G +RL
Sbjct:   47 LLVERYKKAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRL 167          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_CLOTE (Adenine phosphoribosyltransferase OS=Clostridium tetani GN=apt PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.350e-32
Identity = 67/128 (52.34%), Postives = 91/128 (71.09%), Query Frame = 1
Query:   13 VERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 396
            VE  KDKN+ VV G EARGF+FG P+A A+GA FVP+RK  KLP   IS +Y LEYG D +EMH  +++ G+R +I DDL+ATGGT+ + I ++E +G  +V    +IEL +LKGRE+LG+  +  LV
Sbjct:   41 VEELKDKNVDVVVGPEARGFLFGAPLAYALGAGFVPVRKKGKLPSTTISSKYELEYGSDELEMHKDSIKPGQRVVIADDLLATGGTICSVIEMIESLGGEIVSINFLIELTDLKGREKLGKYDISSLV 168          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SHESH (Adenine phosphoribosyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=apt PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.009e-32
Identity = 64/121 (52.89%), Postives = 87/121 (71.90%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            + VE+YKD+  + V G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+HV A+   ++ L++DDL+ATGGT+ A ++L+  +G  V   A VI LP+L G +RL
Sbjct:   48 ILVEKYKDQGFTKVVGTEARGFLFGAPLALELGLGFVPVRKPGKLPRETISESYELEYGHDVLEIHVDAINENDKVLVIDDLLATGGTIEATVKLIRNLGGKVNHAAFVISLPDLGGEKRL 168          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SERP5 (Adenine phosphoribosyltransferase OS=Serratia proteamaculans (strain 568) GN=apt PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.009e-32
Identity = 63/121 (52.07%), Postives = 87/121 (71.90%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            L VER+++  ++ V G EARGF+FG P+ALA+G  FVP+RKP KLP   +SE Y LEYG D +E+H  A+ AG++ L+VDDL+ATGGT+ A  +L+ R+G  V + A +I LP+L G  RL
Sbjct:   62 LLVERFREAGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRATLSESYELEYGTDKLEIHTDAISAGDKVLVVDDLLATGGTIEATAKLIRRLGGEVTDAAFIINLPDLGGEARL 182          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_LACLA (Adenine phosphoribosyltransferase OS=Lactococcus lactis subsp. lactis GN=apt PE=3 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.009e-32
Identity = 69/128 (53.91%), Postives = 91/128 (71.09%), Query Frame = 1
Query:   13 VERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPLFVLV 396
            V+  +DK I +V G EARGFI G P+A A+G  F P+RKP KLP EVI   Y  EYG D + MH  +++ G+R LIVDDL+ATGGT++A I L+E++G  VV CA +IEL ELKGRE++G+    VL+
Sbjct:   41 VQYARDKEIDMVVGPEARGFIIGCPVAFALGVGFAPVRKPGKLPREVIEATYEKEYGTDTLTMHSDSIKPGQRVLIVDDLLATGGTIAATIELVEKMGGIVVGCAFLIELDELKGREKIGDYDYKVLM 168          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_SHEWM (Adenine phosphoribosyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=apt PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32
Identity = 64/126 (50.79%), Postives = 87/126 (69.05%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERLGEKPL 384
            + V+ YKD   + + G EARGF+FG P+AL +G  FVP+RKP KLP E ISE Y LEYG DV+E+H  A+   ++ L+VDDL+ATGGT+ A ++L+ ++G  V   A VI LP+L G +RL E  L
Sbjct:   45 ILVQHYKDHGFTKIVGTEARGFLFGAPLALELGVGFVPVRKPGKLPRETISESYELEYGHDVLELHTDAINENDKVLVVDDLLATGGTIEATVKLIRKLGGEVKHAAFVISLPDLGGAKRLEEMDL 170          
BLAST of CF838714 vs. ExPASy Swiss-Prot
Match: APT_PASMU (Adenine phosphoribosyltransferase OS=Pasteurella multocida GN=apt PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.236e-32
Identity = 66/121 (54.55%), Postives = 89/121 (73.55%), Query Frame = 1
Query:    7 LFVERYKDKNISVVAGIEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGKDVMEMHVGAVQAGERALIVDDLVATGGTLSAAIRLLERVGVHVVECACVIELPELKGRERL 369
            LFV RYK+K I+ V G E+RGFIFG P+ALA+   FV +RKP KLP E IS+ Y LEYG+D +E+H  A+ A ++ LI+DDL+ATGGT+ A ++L++R+G  V + A VI LP+L G  RL
Sbjct:   44 LFVTRYKEKGITKVLGTESRGFIFGAPVALALNVPFVLVRKPGKLPRETISQTYQLEYGQDTLEIHTDAIHAQDKVLIIDDLLATGGTVEATVKLVQRLGGDVQDAAFVINLPDLGGEARL 164          
The following BLAST results are available for this feature:
BLAST of CF838714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SALCH1.378e-3253.72Adenine phosphoribosyltransferase OS=Salmonella ch... [more]
APT_SALA41.378e-3253.72Adenine phosphoribosyltransferase OS=Salmonella ag... [more]
APT_YERE82.350e-3250.00Adenine phosphoribosyltransferase OS=Yersinia ente... [more]
APT_SALAR2.350e-3253.72Adenine phosphoribosyltransferase OS=Salmonella ar... [more]
APT_CLOTE2.350e-3252.34Adenine phosphoribosyltransferase OS=Clostridium t... [more]
APT_SHESH4.009e-3252.89Adenine phosphoribosyltransferase OS=Shewanella se... [more]
APT_SERP54.009e-3252.07Adenine phosphoribosyltransferase OS=Serratia prot... [more]
APT_LACLA4.009e-3253.91Adenine phosphoribosyltransferase OS=Lactococcus l... [more]
APT_SHEWM5.236e-3250.79Adenine phosphoribosyltransferase OS=Shewanella wo... [more]
APT_PASMU5.236e-3254.55Adenine phosphoribosyltransferase OS=Pasteurella m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06G03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838714 ID=CF838714; Name=CF838714; organism=Citrus sinensis; type=EST; length=715bp
CCGTATCTGTTCGTTGAGAGGTACAAGGACAAAAACATCTCCGTTGTTGC
AGGTATTGAAGCTAGGGGTTTTATATTTGGGCCTCCTATTGCATTGGCTA
TTGGGGCAAAGTTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAG
GTTATTTCCGAAGAGTATTCCTTGGAATATGGAAAAGATGTAATGGAGAT
GCATGTAGGTGCTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATC
TAGTTGCAACTGGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGAGCGA
GTTGGGGTGCATGTGGTTGAGTGTGCATGCGTGATTGAACTGCCAGAGCT
AAAGGGTCGGGAACGGCTGGGAGAGAAACCACTATTTGTTCTTGTAAGCT
AAACTTGACCTCAGGTTATGGTTTAAATGCAATGTTTGTGGACCATATGG
GTTTCTAGTCGCTCGGGCTCTGCTCAAAGCTTGAGAACTTCATAAAACCA
TCTGGTAATATAAGAGCAGTTTCATTGGCTTTTTATTTTATTTAAGACGT
TGGGGAAAGAGTGGTGGGGAAGCTGGGTTCTGTCTGCTATTGTTGGGTTT
AAGAATGATAGGCTTATGAAAAAATTCCATCTTCCCGTAAACAGCTGTAT
TTGATGCTTTTCAAATTATCTGGAGATTCTATCTGATGGTTGTTGATGTA
AAAAAAAAAAAAAAA
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