CF838720
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_AERPE (30S ribosomal protein S5P OS=Aeropyrum pernix GN=rps5p PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.767e-45 Identity = 101/203 (49.75%), Postives = 136/203 (67.00%), Query Frame = 2 Query: 191 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETR 793 W P T++GRLV+EGKI+S+++I+ +LPI E +I+D L+ L EV+ + VQK T AG+ TRF+A VVVG+ DG+VGLG +++ AI AI AKL++IPVRRG W G H+VP V GK GSV V + PAP+G G+VA V K VL+ AGI DV+T ++G T+T NF +AT+ L TY F+TP W E R Sbjct: 14 WQPRTRVGRLVKEGKIKSIDEIFRRNLPILETEIVDYLLPG-LDHEVIDVSIVQKMTDAGRITRFRAVVVVGNKDGYVGLGKGKARQFRFAIEKAIRNAKLNIIPVRRGCGSWECTCGEAHSVPFTVRGKSGSVEVILKPAPKGTGLVAGDVAKVVLRLAGISDVWTFTKGETRTSYNFARATYLALRNTYRFVTPADWAEAR 215
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_SULSO (30S ribosomal protein S5P OS=Sulfolobus solfataricus GN=rps5p PE=3 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 5.684e-44 Identity = 92/204 (45.10%), Postives = 137/204 (67.16%), Query Frame = 2 Query: 188 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETR 793 +W P T +G LV+EGKI S+++++ +LPI E +I+D L+ KLK EV+ I VQKQT AG+ +R+K V++G+ DG+V +G +K++ AI+ AI AK+++IPVRRG W G PH++P KV GK GSV V ++PAP+G G+V V K +L +AGI D +++++G T+T NFV+A + L TY F+T W R Sbjct: 12 EWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLLP-KLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTENFVRAGYSALYNTYKFVTLQDWVRKR 214
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_SULIN (30S ribosomal protein S5P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps5p PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.423e-44 Identity = 90/204 (44.12%), Postives = 136/204 (66.67%), Query Frame = 2 Query: 188 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETR 793 +W P T +G LV+ GKI S+++++ +LPI E +I+D L+ KLK EV+ I VQKQT AG+ +R+K V++G+ DG+V +G +K++ AI+ AI AK++++PVRRG W G PH++P KV GK GSV V ++PAP+G G+V V K +L +AGI D +++++G T+T NFV+A + L TY F+T W R Sbjct: 12 EWKPRTSIGNLVKNGKISSIKELFDRNLPITEPEIVDVLLP-KLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNILPVRRGCGSWQCTCGEPHSLPFKVVGKAGSVEVNLLPAPKGTGLVVGSVLKTLLTYAGIRDAWSTTKGETRTTENFVRAGYSALYNTYNFVTLQDWARKR 214
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_PYRCJ (30S ribosomal protein S5P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps5p PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.266e-43 Identity = 94/193 (48.70%), Postives = 131/193 (67.88%), Query Frame = 2 Query: 191 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGF 763 W P T LGR+V+EGKIR++++I+ ++L IKE +I+D L+ LK E++ + VQ+QT AG+R +F+A V VG+ DG+VG+G+ S++V AI A AKL++ PVRRG W PH+VP V+GK GSV V ++PAP+G G+VA V K VL+ AGI DV+T +RG T+T NF A F L TY F Sbjct: 9 WEPKTALGRMVKEGKIRTIDEIFANNLLIKEPEIVDILLPG-LKQELLNLNLVQRQTHAGERNQFQAVVAVGNEDGYVGVGIGKSRQVRQAIEKATREAKLNITPVRRGCGSWKCSCDEPHSVPFVVSGKSGSVEVTLIPAPKGVGLVAGDVAKVVLRLAGIKDVWTKTRGDTRTTLNFALAVFNALRNTYYF 200
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_METS5 (30S ribosomal protein S5P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps5p PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.654e-43 Identity = 96/204 (47.06%), Postives = 136/204 (66.67%), Query Frame = 2 Query: 188 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETR 793 +W P TK+G+LV+EGKI S++++Y ++ I E +IID L+ + +K EV+ I VQKQT AG+ +R+K VV+G+ DG+V +GV SK++ AI+ AI AK+ VIPVRRG W G H++P V+GK GS V + PAP+G G+VA V K +L +AGI DV++ SRG T+T NF+ A + L TY F+TP W R Sbjct: 12 EWKPRTKIGQLVKEGKITSIKELYARNMSIAEPEIIDVLLPN-MKYEVIDIGMVQKQTDAGELSRYKVLVVMGNYDGYVSIGVGKSKQLRVAIQKAIRDAKMHVIPVRRGCGSWECTCGESHSLPFLVSGKSGSAEVVLRPAPKGTGLVAGGVLKTLLTYAGIKDVWSFSRGETRTTDNFIMAGYRALYNTYKFVTPVDWARRR 214
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_PYRIL (30S ribosomal protein S5P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps5p PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.160e-43 Identity = 93/193 (48.19%), Postives = 131/193 (67.88%), Query Frame = 2 Query: 191 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGF 763 W P T+LGRLV+EGKIR++++I+ ++ IKE +I+D L+ LK E++ I VQ+QT AG+R++F+ V VG+ DG+VG+G+ +K+V AI A+ AKL++ PVRRG W PH+VP V GK GSV V ++PAP+G G+VA V K VL+ AGI DV+T +RG T+T NF A + L TY F Sbjct: 9 WEPRTELGRLVKEGKIRTIDEIFANNYIIKEPEIVDILLPG-LKQEILNINVVQRQTHAGERSQFQVVVAVGNEDGYVGVGIGKAKQVRQAIEKAVREAKLNLTPVRRGCGSWKCSCDEPHSVPFVVRGKSGSVEVTLIPAPKGVGLVAGDVAKVVLRLAGIKDVWTQTRGDTRTTLNFAMAVYNALRNTYYF 200
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_SULTO (30S ribosomal protein S5P OS=Sulfolobus tokodaii GN=rps5p PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.821e-43 Identity = 93/200 (46.50%), Postives = 134/200 (67.00%), Query Frame = 2 Query: 188 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFW 781 +W P TK+G+LV+EGKI S+++I+ + PI E +I+D L+ KLK EVM I VQKQT AG+ +++K +V+G+ DG+V G +K++ AI+ AI AK+++IPVRRG W G H++P KV GK GSV V ++PAP+G G+V K +L +AGI D ++ +RGST T NF+KA + L TY F+TP W Sbjct: 12 EWKPRTKVGQLVKEGKITSMKEIFEKNYPITEPEIVDVLLP-KLKYEVMDIKIVQKQTDAGEISKYKVLIVMGNMDGYVSYGTGKAKQLRVAIQKAIKNAKMNIIPVRRGCGSWECTCGEAHSLPFKVYGKAGSVEVLLMPAPKGTGLVVGPALKTLLTYAGIKDAWSLTRGSTYTTENFIKAGYNALYNTYKFVTPVDW 210
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_PYRAR (30S ribosomal protein S5P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps5p PE=3 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 8.207e-43 Identity = 90/193 (46.63%), Postives = 132/193 (68.39%), Query Frame = 2 Query: 191 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGF 763 W P T+LGR+V+EGKIR++++++ ++ IKE +I+D L+ LK E++ + VQ+QT AG+R+ F+A V VG+ DG+VG+G+ +++V AI A+ AKL++IPVRRG W PH+VP V GK GSV V ++PAP+G G+VA V K VL+ AG+ DV+T +RG T+T NF A + L TY F Sbjct: 9 WEPRTELGRMVKEGKIRTIDEVFANNYIIKEPEIVDILVPG-LKQELLNVNIVQRQTHAGERSLFQAVVAVGNEDGYVGVGIGKARQVRQAIEKAVREAKLNLIPVRRGCGSWKCSCDEPHSVPFVVKGKSGSVEVTLIPAPKGVGLVAGDVAKAVLRLAGVKDVWTHTRGDTRTTLNFALAVYNALRNTYYF 200
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_METKA (30S ribosomal protein S5P OS=Methanopyrus kandleri GN=rps5p PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 8.207e-43 Identity = 90/193 (46.63%), Postives = 133/193 (68.91%), Query Frame = 2 Query: 188 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSS-----RGSTKTLGNFVKATFECL 745 +W P TKLGR+V+EG+I+++++++ I E +I+D L+ L++EV+ + VQK ++G+R RF+ VVVG+ DG VG+G ++EV AIR AI AKL++I VRRG W GRPH++P ++TGKCGSV + + PAPRG G+VA +KVL+ AGI+DV+T + +G T+T NF KATF+ L Sbjct: 9 EWEPKTKLGRMVKEGEIKTIDEVFAQGWKILEPEIVDWLLPD-LEEEVLDVNMVQKMHKSGRRVRFRVTVVVGNKDGFVGVGQGKAREVGPAIRAAIDRAKLNIIKVRRGCGSWECGCGRPHSIPFEITGKCGSVRITLKPAPRGTGLVAGETAQKVLEMAGIEDVWTKTTGGKGKGETRTTINFAKATFDAL 200
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_PYRAE (30S ribosomal protein S5P OS=Pyrobaculum aerophilum GN=rps5p PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.072e-42 Identity = 90/193 (46.63%), Postives = 131/193 (67.88%), Query Frame = 2 Query: 191 WVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGF 763 W P T+LGR+V+EGKIR++++I+ ++ IKE +I+D L+ LK E++ + VQ+QT AG+R +F+A V VG+ DG+VG+G+ +++V AI A AKL+++PVRRG W PH+VP V GK GSV + ++PAP+G G+VA V K VL+ AGI DV+T +RG T+T NF A + L TY F Sbjct: 25 WEPRTELGRMVKEGKIRTIDEIFANNYIIKEPEIVDILLPG-LKQELLNVNLVQRQTHAGERNQFQAVVAVGNEDGYVGVGIGKARQVRQAIEKATREAKLNLVPVRRGCGSWKCSCDEPHSVPFVVRGKSGSVEITLIPAPKGVGLVAGDVAKAVLRLAGIKDVWTKTRGDTRTTLNFAMAVYNALRNTYYF 216 The following BLAST results are available for this feature:
BLAST of CF838720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 489
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838720 ID=CF838720; Name=CF838720; organism=Citrus sinensis; type=EST; length=811bpback to top |