CF838720
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_LACPL (30S ribosomal protein S5 OS=Lactobacillus plantarum GN=rpsE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.939e-16 Identity = 59/148 (39.86%), Postives = 81/148 (54.73%), Query Frame = 2 Query: 317 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL--LKT 754 L D V+ I + K + G+R RF A V+VGD GHVG G ++EV AIR A AK ++I V +G T+P + G G + + PA G+G+ A + V++ AG+DDV TS R + T N V+ATFE L LKT Sbjct: 11 LDDNVVAINRITKVVKGGRRLRFAALVIVGDHKGHVGFGTGKAQEVPEAIRKASEAAKKNLITV------PMVGT--TIPHEALGVYGGGRIMLKPAVEGSGVAAGGAVRAVMELAGVDDV-TSKRLGSNTPVNVVRATFEGLKSLKT 149
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_LACBA (30S ribosomal protein S5 OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.939e-16 Identity = 54/144 (37.50%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 314 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 745 +L+D V+ I + K + G+R RF A V+VGD +GHVG G ++EV AIR A+ A+ ++I V +G T+P +V G G + + PA G+G+ A + V++ AG+ DV TS R + T N V+ATF+ L Sbjct: 11 ELEDNVVAINRITKVVKGGRRLRFAALVIVGDKNGHVGFGTGKAQEVPEAIRKAVEAARKNLIEV------PIVGT--TIPHEVLGTFGGGKIMLKPAAEGSGVTAGGAVRSVMELAGVADV-TSKRLGSNTPVNAVRATFDGL 145
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_ENTFA (30S ribosomal protein S5 OS=Enterococcus faecalis GN=rpsE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.939e-16 Identity = 57/144 (39.58%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 314 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 745 +L+D V+ I V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK +++ V +G T+P +V G G + M PA G+G+ A + VL+ AG+ D+ + S GS + N V+AT E L Sbjct: 10 ELEDRVVAINRVTKVVKGGRRLRFAALVVVGDKNGHVGFGTGKAQEVPEAIRKAIEDAKKNLVEV------PMVG--STIPHEVIGVFGGGRILMKPAVEGSGVAAGGPVRAVLELAGVADITSKSLGSNTPI-NVVRATVEGL 144
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_LEUMM (30S ribosomal protein S5 OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.839e-16 Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 2 Query: 314 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 745 +L++ V+ I V K + G+R RF A VVVGD GHVG G ++EV AIR AI AK +I V T+P V G+ G + + PA G+G+ A + V++ AGI DV S GS + N ++ATF+ L Sbjct: 12 ELEENVVAINRVTKVVKGGRRLRFAALVVVGDKQGHVGFGTGKAQEVPEAIRKAIEDAKRKLITVPT--------VSTTIPHDVLGEWGGGKILVKPAEEGSGVAAGGAARSVMELAGIADVTAKSLGSATPI-NVIRATFDAL 146
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_GEOSW (30S ribosomal protein S5 OS=Geobacillus sp. (strain WCH70) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.839e-16 Identity = 55/144 (38.19%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 314 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 745 +L++ V+ + V K + G+R RF A VVVGD +GHVG G ++EV AIR AI AK ++I V +G T+P +V G G+ + + PA G G++A + VL+ AGI D+ + S GS + N V+AT + L Sbjct: 10 ELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIEV------PIVGT--TIPHEVIGHFGAGKIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPI-NMVRATVDGL 144
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_FUSNN (30S ribosomal protein S5 OS=Fusobacterium nucleatum subsp. nucleatum GN=rpsE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.839e-16 Identity = 45/145 (31.03%), Postives = 80/145 (55.17%), Query Frame = 2 Query: 311 HKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 745 ++ +++++KI V K T+ G+ F VGD +G +GLG+ + V AIR AI AK +++ + + +T+P ++ GK G+ T+ M PA G G++A +++L+ G+ D+ T +GS + N +AT E L Sbjct: 7 NQYQEKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIVKISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDILTKIKGS-RNKHNVARATVEAL 142
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_BACSK (30S ribosomal protein S5 OS=Bacillus clausii (strain KSM-K16) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.839e-16 Identity = 54/140 (38.57%), Postives = 82/140 (58.57%), Query Frame = 2 Query: 314 KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKAT 733 +L+++V+ I V K + G+R RF A VVVGD +GHVG G+ ++EV AIR A+ AK ++I V T+P ++ G+ G+ V + PA G G++A + VL+ AGI DV + S GS+ + N V+AT Sbjct: 10 ELEEKVVTINRVAKVVKGGRRFRFAALVVVGDKNGHVGFGMGKAQEVPEAIRKAVEDAKKNLIEVPI--------VNTTIPHQIVGRFGAGRVFLKPASEGTGVIAGGPVRAVLELAGIGDVLSKSLGSSNPI-NMVRAT 140
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_ANATD (30S ribosomal protein S5 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.839e-16 Identity = 58/146 (39.73%), Postives = 77/146 (52.74%), Query Frame = 2 Query: 308 GHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 745 G LK+ V+ I V K + G+R +F A VVVGD +GHVG G + E+ AIR AI AK +I V +G T+P + G G+ V + PAP G G++A + V + AGI D+ T S GS N V AT E L Sbjct: 10 GLDLKERVVNINRVAKVVKGGKRLKFSAIVVVGDENGHVGAGHGKAAEIPDAIRKAIEDAKKHLIEV------PIVGT--TIPHEAIGDFGASKVLIKPAPEGTGVIAGGAVRAVCELAGIKDIRTKSLGSNNP-ANVVHATIEAL 146
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_OENOB (30S ribosomal protein S5 OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.014e-16 Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 2 Query: 317 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 745 L++ V+ I V K + G+R RF A V+VGD +GHVG G ++EV AIR A+ AK +I V +G T+P +V G G V + PA G+G+ A + +++ AGI DV S GS+ T N V+ATF+ L Sbjct: 13 LEENVVSINRVTKVVKGGRRLRFSALVIVGDRNGHVGFGTGKAQEVPEAIRKAVEDAKRHLIKV------PTVGT--TIPHQVLGVDGGGKVLLKPASEGSGVAAGGSTRPIMELAGIPDVTAKSLGSS-TAVNVVRATFDGL 146
BLAST of CF838720 vs. ExPASy Swiss-Prot
Match: RS5_OCEIH (30S ribosomal protein S5 OS=Oceanobacillus iheyensis GN=rpsE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.014e-16 Identity = 55/148 (37.16%), Postives = 84/148 (56.76%), Query Frame = 2 Query: 317 LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL--LKT 754 L++ V+ + V K + G+R RF A VVVGD +GHVG G ++EV AI+ A+ AK ++I V +G T+P ++ G+ GS V M PA G G+++ + +L+ AG+ D+ T S GS + N ++AT L LKT Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKNLISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGSNTPI-NMIRATLNGLTNLKT 150 The following BLAST results are available for this feature:
BLAST of CF838720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 489
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838720 ID=CF838720; Name=CF838720; organism=Citrus sinensis; type=EST; length=811bpback to top |