CF838735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838735 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.285e-37 Identity = 72/160 (45.00%), Postives = 106/160 (66.25%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 557 K +++GD G GKS L+L+F +F + TIG F ++ + ++ +K +IWDTAGQE + S+ YYRGAA A++VYDIT + +F W+++ + N NMV+ L GNK+DL R+V EE +A+A+E+GL FMETSAKTA+NV + F AK + Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
BLAST of CF838735 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37 Identity = 73/163 (44.79%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
BLAST of CF838735 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37 Identity = 73/163 (44.79%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
BLAST of CF838735 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37 Identity = 73/163 (44.79%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
BLAST of CF838735 vs. ExPASy Swiss-Prot
Match: RB11A_PIG (Ras-related protein Rab-11A OS=Sus scrofa GN=RAB11A PE=2 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37 Identity = 73/163 (44.79%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
BLAST of CF838735 vs. ExPASy Swiss-Prot
Match: RB11A_MOUSE (Ras-related protein Rab-11A OS=Mus musculus GN=Rab11a PE=1 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37 Identity = 73/163 (44.79%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
BLAST of CF838735 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37 Identity = 72/153 (47.06%), Postives = 106/153 (69.28%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIF 536 K+VL+GD GKS ++ RF + +F +STIG F ++TL ++ TVK +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ +W++EL+ + N+V+ L GNK DL++ R V E+A+ +A++ GLFF+ETSA ATNV F Sbjct: 19 KVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAF 171
BLAST of CF838735 vs. ExPASy Swiss-Prot
Match: RB11A_HUMAN (Ras-related protein Rab-11A OS=Homo sapiens GN=RAB11A PE=1 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37 Identity = 73/163 (44.79%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
BLAST of CF838735 vs. ExPASy Swiss-Prot
Match: RB11A_CHICK (Ras-related protein Rab-11A OS=Gallus gallus GN=RAB11A PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37 Identity = 73/163 (44.79%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175
BLAST of CF838735 vs. ExPASy Swiss-Prot
Match: RB11A_CANFA (Ras-related protein Rab-11A OS=Canis familiaris GN=RAB11A PE=2 SV=3) HSP 1 Score: 154.451 bits (389), Expect = 6.903e-37 Identity = 73/163 (44.79%), Postives = 111/163 (68.10%), Query Frame = 3 Query: 78 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 566 K+VL+GD G GKS+L+ RF + +F +STIG F ++++ V+ T+K +IWDTAGQERY ++ YYRGA A++VYDI ++E ++W++EL+ + N+V+ L GNK+DL R V +EA+A+A++NGL F+ETSA +TNV F I + R+ Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRI 175 The following BLAST results are available for this feature:
BLAST of CF838735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838735 ID=CF838735; Name=CF838735; organism=Citrus sinensis; type=EST; length=826bpback to top |