CF838758

Overview
NameCF838758
Unique NameCF838758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838758 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.539e-20
Identity = 72/206 (34.95%), Postives = 104/206 (50.49%), Query Frame = 3
Query:  201 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 797
            F  G LK++      +AEFIAT LF++  V + +   K  ++      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPA
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPA 199          
BLAST of CF838758 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.539e-20
Identity = 72/206 (34.95%), Postives = 104/206 (50.49%), Query Frame = 3
Query:  201 FEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 797
            F  G LK++      +AEFIAT LF++  V + +   K  ++      G+  +A A    +FV V   A ISGGH+NPAVTLGL +   +++    FY + Q LG+     ++K          +  G  V  HG   G     G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPA
Sbjct:   13 FSVGSLKAY------VAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLK---------YVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPA 199          
BLAST of CF838758 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.539e-20
Identity = 60/160 (37.50%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  336 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 797
            +G  G+A AFG  +  + Y   GISGGH NPAV+LGL +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPA
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPA 186          
BLAST of CF838758 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.539e-20
Identity = 60/160 (37.50%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  336 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 797
            +G  G+A AFG  +  + Y   GISGGH NPAV+LGL +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPA
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPA 186          
BLAST of CF838758 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.234e-20
Identity = 67/190 (35.26%), Postives = 98/190 (51.58%), Query Frame = 3
Query:  237 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 797
            +A +AEFI+T +F++  V + +   K          G+  +A   G  +FV V   A ISGGH+NPAVT GL L  ++++   +FY + Q LGAI GA +V+   G         G           +G+  EII TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L   P +G  +NPA
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGAF-------EGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPA 198          
BLAST of CF838758 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 7.234e-20
Identity = 66/195 (33.85%), Postives = 96/195 (49.23%), Query Frame = 3
Query:  213 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 797
            EL+S SF+RA  AEF AT  +++  + + +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA  Y+  Q LGA+ GA V+         G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L HL  +  TG G+NPA
Sbjct:    1 ELRSASFWRAIFAEFFATLFYVFFGLGSSLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPA 184          
BLAST of CF838758 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 9.447e-20
Identity = 66/195 (33.85%), Postives = 95/195 (48.72%), Query Frame = 3
Query:  213 ELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 797
            EL+S SF+RA  AEF AT  +++  +   +           + +  +A AFG  +  LV     ISG H+NPAVT    +  ++SL RA  Y+  Q LGA+ GA V+         G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L HL  +  TG G+NPA
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFGLGASLRWAPG-----PLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSV----ALAVGFSLTLGHLFGMYYTGAGMNPA 186          
BLAST of CF838758 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.447e-20
Identity = 60/160 (37.50%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  336 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 797
            +G  G+A AFG  +  + Y   GISGGH NPAV+LGL +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+HL +IP+T T +NPA
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPA 186          
BLAST of CF838758 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.234e-19
Identity = 73/199 (36.68%), Postives = 111/199 (55.78%), Query Frame = 3
Query:  210 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 797
            G+  S +  +A +AEFIAT LF++  V + +  G + +       G+  IA A    +FV V   A ISGGH+NPAVT GL +   +++   +FY V Q LGA   A ++ GF+  G+    A   + VA G ++ +G+  E++ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPA
Sbjct:   10 GDSFSATSIKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATV-ACLLLGFVTHGK----AIPTHAVA-GISELEGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPA 198          
BLAST of CF838758 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.611e-19
Identity = 72/199 (36.18%), Postives = 108/199 (54.27%), Query Frame = 3
Query:  210 GELKSWSFYRAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 797
            G+  S +  +A +AEFIAT LF++  V + +  G + +       G+  IA A    +FV V   A ISGGH+NPAVT GL +   +++   LFY + Q LGA     ++K F+  G+     G A     G ++ +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NPA
Sbjct:   10 GDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLK-FVTHGKAIPTHGVA-----GISELEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPA 198          
The following BLAST results are available for this feature:
BLAST of CF838758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
TIP2_TOBAC5.539e-2034.95Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC5.539e-2034.95Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
AQPZ_BRUAB5.539e-2037.50Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA25.539e-2037.50Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
TIP22_ORYSJ7.234e-2035.26Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
MIP_RAT7.234e-2033.85Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE9.447e-2033.85Lens fiber major intrinsic protein OS=Mus musculus... [more]
AQPZ_BRUME9.447e-2037.50Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
TIP21_MAIZE1.234e-1936.68Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP21_ORYSJ1.611e-1936.18Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06I03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838758 ID=CF838758; Name=CF838758; organism=Citrus sinensis; type=EST; length=797bp
CACAACATCAACCGGTCACAAACAAAAAAGCAAGTGCTTCTTATTGACTA
TTCCGTGTTTTTGAGGGAGTAGCAGAAATGGAAGGCAAAGAAGAGGATGT
TAGACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGACGGCGG
CTCAGACCCAAGATGGCAAGGACTACGTTGAACCCCCACCGGCGCCGCTC
TTCGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGTATAGC
CGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGACAGTGA
TGGGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCATTCAAGGG
ATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGCACAGC
TGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTCT
TGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCAG
TGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTTAAGGGTTTCATGGGTGC
CGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGCT
ACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTT
GTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACTC
TCATGTTCCTATTTTGGCTCCTCTGCCAATTGGGTTCGCTGTGTTTTTGG
TTCACTTGGCCACTATCCCAATTACCGGAACTGGCATCAACCCAGCG
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