CF838760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838760 vs. ExPASy Swiss-Prot
Match: SEC14_YARLI (SEC14 cytosolic factor OS=Yarrowia lipolytica GN=SEC14 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.540e-12 Identity = 59/206 (28.64%), Postives = 95/206 (46.12%), Query Frame = 3 Query: 213 TLVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILSKPIVPTELYRAVRDSQLIGMAGY---SREGLPVFAVGVGLSTFDKASVHCYVQSHIQINEYRDRVI---------LPSASAKHGRPITTCVKVLDMTGLKLSALSQIK-LLTIISTVDDLNYPEKTNTYYIVNVPYIFSACWKVVKPLLQERTRKKIQVLQGSGRDELL 791 TL+RFL+AR +V A +M +C WR + + IL Y+ ++ + Y ++G PV+ VG K ++H + Q R+ V LP+ S G I T +LD+ G+ LS+ SQ+ L S + YPE+ +Y++N P+ FS + V+K L T KI V + +++LL Sbjct: 56 TLLRFLRARKFDVPLAQEMWENCEKWRKEFGTNTILED-----FWYKEKKEVAKLYPQYYHKTDKDGRPVYVENVG-----KVNIHEMYKITTQERMLRNLVWEYESFVRHRLPACSRVVGHLIETSCTILDLKGVSLSSASQVYGFLKDASNIGQNYYPERMGKFYLINAPFGFSTVFSVIKRFLDPVTVSKIHVYGSNYKEKLL 251
BLAST of CF838760 vs. ExPASy Swiss-Prot
Match: PATL6_ARATH (Patellin-6 OS=Arabidopsis thaliana GN=PATL6 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11 Identity = 54/206 (26.21%), Postives = 101/206 (49.03%), Query Frame = 3 Query: 216 LVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILSKPIVPTELYRAVRDSQLIGMAGYSREGLPVFAVGVGLSTFDKASVHCYVQSHIQINEY---RDRVILPSASAKHGRP--ITTCVKVLDMTGLKLSALSQIKLLTIISTVDDLNYPEKTNTYYIVNVPYIFSACWKVVKPLLQERTRKK-IQVLQGSGRDELLKIMDFESL 815 L++FL+ARD V+ + +ML CL WR + + +K+ + + +L + ++ M GY +EG PV G+ +K ++N++ R +V+ H +P + + ++V D+ + L ++ I+S D NYPE T +NVP+ FS + + P L +RT+ K + +G+ + L K + E + Sbjct: 85 LLKFLRARDFKVADSLRMLEKCLEWREEFKAEKLTEEDLGFKDL-----EGKVAYMRGYDKEGHPVCYNAYGVFK-EKEMYERVFGDEEKLNKFLRWRVQVLERGVKMLHFKPGGVNSIIQVTDLKDMPKREL-RVASNQILSLFQD-NYPELVATKIFINVPWYFSVIYSMFSPFLTQRTKSKFVMSKEGNAAETLYKFIRPEDI 282
BLAST of CF838760 vs. ExPASy Swiss-Prot
Match: S14L3_RAT (SEC14-like protein 3 OS=Rattus norvegicus GN=Sec14l3 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.383e-11 Identity = 59/206 (28.64%), Postives = 99/206 (48.06%), Query Frame = 3 Query: 216 LVRFLKARDGNVSKAHKMLMDCLHWRAQNEIDKILSKPIVPTELYRAVRDSQLIGMAGYSREGLPVFAVGVGLSTFDKASVHCYVQSHIQINEYRD--RVI--LPSASAKHGRPITTCVKVLDMTGLKLSALSQ--IKLLTIISTVDDLNYPEKTNTYYIVNVPYIFSACWKVVKPLLQERTRKKIQVLQGSGRDELLKIMDFESL 815 L+R+L+AR+ ++ K+ ML + +R +ID IL P E+ + G+ GY R+G PV+ +G K + + + + RD R++ + + GR I T V + D GL L + +++ + + NYPE IV +F + ++KP L E TR+KI VL S ++ LLK++ E L Sbjct: 38 LLRWLRARNFDLQKSEAMLRKYMEFRKTMDIDHILDWQ--PPEVIQKYMPG---GLCGYDRDGCPVWYDIIG-PLDPKGLLFSVTKQDLLKTKMRDCERILHECDLQTERLGRKIETIVMIFDCEGLGLKHFWKPLVEVYQEFFGLLEENYPETLKFMLIVKATKLFPVGYNLMKPFLSEDTRRKIVVLGNSWKEGLLKLISPEEL 237 The following BLAST results are available for this feature:
BLAST of CF838760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838760 ID=CF838760; Name=CF838760; organism=Citrus sinensis; type=EST; length=815bpback to top |