CF838763

Overview
NameCF838763
Unique NameCF838763
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF838763 vs. ExPASy Swiss-Prot
Match: ACP_XANOP (Acyl carrier protein OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=acpP PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:  145 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 369
            S + +RV  +V     V   +VT +A F +DLG DSLDTVE+VMALEEEF  EIPD EA+KI ++  A+D++ SH
Sbjct:    2 STIEERVKKIVVEQLGVKEEEVTTSASFVDDLGADSLDTVELVMALEEEFECEIPDEEAEKITSVQQAIDYVKSH 76
[Close]
BLAST of CF838763 vs. ExPASy Swiss-Prot
Match: ACP_XANOM (Acyl carrier protein OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=acpP PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 39/75 (52.00%), Postives = 52/75 (69.33%), Query Frame = 1 
Query:  145 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 369
            S + +RV  +V     V   +VT +A F +DLG DSLDTVE+VMALEEEF  EIPD EA+KI ++  A+D++ SH
Sbjct:    2 STIEERVKKIVVEQLGVKEEEVTTSASFVDDLGADSLDTVELVMALEEEFECEIPDEEAEKITSVQQAIDYVKSH 76
[Close]
BLAST of CF838763 vs. ExPASy Swiss-Prot
Match: ACP_SHISS (Acyl carrier protein OS=Shigella sonnei (strain Ss046) GN=acpP PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  145 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 369
            S + +RV  ++     V   +VT NA F  DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D+I  H
Sbjct:    2 STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 76
[Close]
BLAST of CF838763 vs. ExPASy Swiss-Prot
Match: ACP_SHIF8 (Acyl carrier protein OS=Shigella flexneri serotype 5b (strain 8401) GN=acpP PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  145 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 369
            S + +RV  ++     V   +VT NA F  DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D+I  H
Sbjct:    2 STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 76
[Close]
BLAST of CF838763 vs. ExPASy Swiss-Prot
Match: ACP_SHIDS (Acyl carrier protein OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=acpP PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  145 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 369
            S + +RV  ++     V   +VT NA F  DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D+I  H
Sbjct:    2 STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 76
[Close]
BLAST of CF838763 vs. ExPASy Swiss-Prot
Match: ACP_SHIBS (Acyl carrier protein OS=Shigella boydii serotype 4 (strain Sb227) GN=acpP PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  145 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 369
            S + +RV  ++     V   +VT NA F  DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D+I  H
Sbjct:    2 STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 76
[Close]
BLAST of CF838763 vs. ExPASy Swiss-Prot
Match: ACP_SHIB3 (Acyl carrier protein OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=acpP PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  145 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 369
            S + +RV  ++     V   +VT NA F  DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D+I  H
Sbjct:    2 STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 76
[Close]
BLAST of CF838763 vs. ExPASy Swiss-Prot
Match: ACP_SALTY (Acyl carrier protein OS=Salmonella typhimurium GN=acpP PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  145 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 369
            S + +RV  ++     V   +VT NA F  DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D+I  H
Sbjct:    2 STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 76
[Close]
BLAST of CF838763 vs. ExPASy Swiss-Prot
Match: ACP_SALTI (Acyl carrier protein OS=Salmonella typhi GN=acpP PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  145 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 369
            S + +RV  ++     V   +VT NA F  DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D+I  H
Sbjct:    2 STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 76
[Close]
BLAST of CF838763 vs. ExPASy Swiss-Prot
Match: ACP_SALSV (Acyl carrier protein OS=Salmonella schwarzengrund (strain CVM19633) GN=acpP PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 1 
Query:  145 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 369
            S + +RV  ++     V   +VT NA F  DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D+I  H
Sbjct:    2 STIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH 76
The following BLAST results are available for this feature:
BLAST of CF838763 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
ACP_XANOP3.511e-1452.00Acyl carrier protein OS=Xanthomonas oryzae pv. ory... [more]
ACP_XANOM3.511e-1452.00Acyl carrier protein OS=Xanthomonas oryzae pv. ory... [more]
ACP_SHISS3.511e-1453.33Acyl carrier protein OS=Shigella sonnei (strain Ss... [more]
ACP_SHIF83.511e-1453.33Acyl carrier protein OS=Shigella flexneri serotype... [more]
ACP_SHIDS3.511e-1453.33Acyl carrier protein OS=Shigella dysenteriae serot... [more]
ACP_SHIBS3.511e-1453.33Acyl carrier protein OS=Shigella boydii serotype 4... [more]
ACP_SHIB33.511e-1453.33Acyl carrier protein OS=Shigella boydii serotype 1... [more]
ACP_SALTY3.511e-1453.33Acyl carrier protein OS=Salmonella typhimurium GN=... [more]
ACP_SALTI3.511e-1453.33Acyl carrier protein OS=Salmonella typhi GN=acpP P... [more]
ACP_SALSV3.511e-1453.33Acyl carrier protein OS=Salmonella schwarzengrund ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06I13_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06I13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838763 ID=CF838763; Name=CF838763; organism=Citrus sinensis; type=EST; length=686bp
ATGGCGGCGCGCTGAGGTGCCTTGCTAAAGTACCTGAGAGTGAACGTGGC
CACCGTGCAACGAAACCCTAGCCCCTTTTCTCTCTCATTCAACTCCATAC
GCCGCTGTTTCGCGGAAGAGGTCAGGGGCTCTTTCCTCGACAAATCTGAA
GTCACCGATCGCGTCATTTCCGTCGTTAAAAACTTCCAGAAAGTTGATCC
TTCCAAGGTTACGGTTAATGCCCATTTCCAGAATGATCTTGGGTTGGATA
GTTTGGACACTGTGGAGGTCGTGATGGCACTTGAAGAAGAATTCGGATTC
GAGATCCCAGATAATGAGGCAGACAAGATCAATACCATCAATATGGCTGT
CGATTTCATTGCTTCTCATCCTCAGGCTAAGTAGGGGAAACTATGAAGCC
CTACGATGCTATTTTCACTCTTTTGATGTTCAGAATTAGCAGCAGCATTA
GAATTCTCTTATCCCGGTACCTAAAATTTTTGTTCCTTAAAAAACGAGTA
AACTTTAAAAGCCTTTCTGGTTTTCCGACCCCATTTGAACTCTGCTTGAA
GAGTATTGTTTTTGGGAGACTTGCCGCGTCGAAAATGCTTTCCATTAAAT
TGGAAGATTGGAATGGTCTGGTATTTCTTCACTACTCATCATATATGTTC
TTTCATTTTAATAAAGATCATGTAGGAGACAAAAAA
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