CF838767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H3_CHITH (Histone H3 OS=Chironomus thummi thummi PE=3 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 116/136 (85.29%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 31 MARTKQTALKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 438 MARTKQTA KSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H32_XENTR (Histone H3.2 OS=Xenopus tropicalis GN=TGas081o10.1 PE=2 SV=3) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 116/136 (85.29%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 31 MARTKQTALKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 438 MARTKQTA KSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H32_XENLA (Histone H3.2 OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 116/136 (85.29%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 31 MARTKQTALKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 438 MARTKQTA KSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H32_PORAF (Histone H3.2 OS=Poroderma africanus PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 116/136 (85.29%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 31 MARTKQTALKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 438 MARTKQTA KSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H32_ONCMY (Histone H3.2 OS=Oncorhynchus mykiss PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 116/136 (85.29%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 31 MARTKQTALKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 438 MARTKQTA KSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H32_MUSPA (Histone H3.2 OS=Mus pahari GN=H312 PE=2 SV=3) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 116/136 (85.29%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 31 MARTKQTALKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 438 MARTKQTA KSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H32_MOUSE (Histone H3.2 OS=Mus musculus GN=Hist1h3b PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 116/136 (85.29%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 31 MARTKQTALKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 438 MARTKQTA KSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H32_ICTBU (Histone H3.2 OS=Ictiobus bubalus PE=1 SV=2) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 116/136 (85.29%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 31 MARTKQTALKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 438 MARTKQTA KSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H32_HUMAN (Histone H3.2 OS=Homo sapiens GN=HIST2H3A PE=1 SV=3) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 116/136 (85.29%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 31 MARTKQTALKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 438 MARTKQTA KSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H32_DANRE (Histone H3.2 OS=Danio rerio GN=zgc:113984 PE=2 SV=3) HSP 1 Score: 223.402 bits (568), Expect = 7.784e-58 Identity = 116/136 (85.29%), Postives = 118/136 (86.76%), Query Frame = 1 Query: 31 MARTKQTALKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 438 MARTKQTA KSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136 The following BLAST results are available for this feature:
BLAST of CF838767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838767 ID=CF838767; Name=CF838767; organism=Citrus sinensis; type=EST; length=641bpback to top |