CF838767

Overview
NameCF838767
Unique NameCF838767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF838767 vs. ExPASy Swiss-Prot
Match: H3L2_LILLO (Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE=2 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 2.898e-12
Identity = 46/86 (53.49%), Postives = 50/86 (58.14%), Query Frame = 1 
Query:   31 MARTKQTALKSTGGKAPRKQLATKAARKS-APATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF 285
            MAR K TA  STGGKAPRKQLA+KA RK+  P T GVK+P     G                  RKLPFQ LVR+I QD KT LRF
Sbjct:    1 MARMKHTARMSTGGKAPRKQLASKALRKAPPPPTKGVKQPTTTTSGKWRFARFH----------RKLPFQGLVRKIWQDLKTHLRF 76
The following BLAST results are available for this feature:
BLAST of CF838767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H3L2_LILLO2.898e-1253.49Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06I19_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06I19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838767 ID=CF838767; Name=CF838767; organism=Citrus sinensis; type=EST; length=641bp
GAAAAAAGAAACCCTTTATTTCCCAAATCAATGGCCCGCACGAAGCAAAC
CGCCCTCAAGTCCACCGGAGGCAAGGCCCCAAGAAAGCAACTGGCGACCA
AGGCGGCAAGGAAATCCGCACCGGCAACCGGAGGAGTGAAGAAGCCTCAC
AGGTTCCGTCCAGGAACTGTCGCACTCCGTGAAATCAGGAAGTACCAGAA
GAGCACTGAGCTTCTTATTAGGAAGCTTCCGTTCCAGAGATTGGTGAGGG
AAATCGCTCAGGATTTCAAGACGGATCTGAGGTTCCAGAGCAGCGCTGTT
GCTGCACTTCAGGAGGCTGCTGAGGCTTATCTTGTTGGGCTGTTCGAGGA
CACCAACCTCTGCGCTATTCATGCTAAGAGGGTCACTATTATGCCCAAGG
ACATTCAGCTTGCTAGGCGGATCAGGGGTGAAAGGGCTTAAGAACTTTCT
GATTTAATGTATTTTGTTCCTCTTACTTCGATGTTAGTCTTTTGGTCAAT
ATTTGGGGTTTAGATTTATGTTTGGATGTCTATCCGATGGATTAGATCGG
GTCTAGTATGTATCTAAGGTGTTTGTTAAAATGTTTTCGAGGGTTTTTAA
TCTAATAGATAATTAGCCTTTTAATAAAAAAAAAAAAAAAA
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