CF838768

Overview
NameCF838768
Unique NameCF838768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 1.395e-38
Identity = 96/221 (43.44%), Postives = 127/221 (57.47%), Query Frame = 1
Query:  229 FYRAGIAEFIATFLFLYISVLTVMGV---VKSNTKCSTVGIQ-GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            F+RA +AEF+A  LF++IS+ + +G    +KSN     V     ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y++ QC+GAI    ++ G                +A G   G GLG EIIGT  LV  V + TD +R  RD  +    PL IGF+V L HL  I  TG GINPARS G+++I    H + DHWIFWVGPFIG
Sbjct:   10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGI--TSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWVGPFIG 221          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 1.821e-38
Identity = 96/221 (43.44%), Postives = 127/221 (57.47%), Query Frame = 1
Query:  229 FYRAGIAEFIATFLFLYISVLTVMGV---VKSNTKCSTVGIQ-GIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            F+RA +AEF+A  LF++IS+ + +G    +KSN     V     ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y++ QC+GAI    ++ G                +A G   G GLG EIIGT  LV  V + TD +R  RD  +    PL IGF+V L HL  I  TG GINPARS G+++I    H + DHWIFWVGPFIG
Sbjct:   10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGI--TSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWVGPFIG 222          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 3.107e-38
Identity = 95/221 (42.99%), Postives = 127/221 (57.47%), Query Frame = 1
Query:  229 FYRAGIAEFIATFLFLYISVLTVMG----VVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            F+RA +AEF+A  LF++IS+ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y++ QC+GAI    ++ G                +A G   G GLG EIIGT  LV  V + TD +R  RD  +   APL IGF+V L HL  I  TG GINPARS G+A+I    H + DHW+FWVGPFIG
Sbjct:   10 FWRAVVAEFLAMTLFIFISIGSALGFQYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGI--TSSLPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVI---THNFQDHWVFWVGPFIG 221          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 4.057e-38
Identity = 95/219 (43.38%), Postives = 126/219 (57.53%), Query Frame = 1
Query:  229 FYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            F+RA +AEF+AT LF++IS+ + +G      N + +      ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RAL Y++ QC+GAI    ++ G                +A G   G GLG EIIGT  LV  V + TD +R  RD  +   APL IG +V L HL  I  TG GINPARS G+A+I    H + +HWIFWVGPFIG
Sbjct:   10 FWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGI--TSSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIG 219          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 2.014e-37
Identity = 94/219 (42.92%), Postives = 125/219 (57.08%), Query Frame = 1
Query:  229 FYRAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            F+RA +AEF+A  LF++IS+ + +G      N + +      ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RAL Y++ QC+GAI    ++ G                +A G   G GLG EIIGT  LV  V + TD +R  RD  +   APL IG +V L HL  I  TG GINPARS G+A+I    H + +HWIFWVGPFIG
Sbjct:   10 FWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGI--TSSLPGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIG 219          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 5.859e-37
Identity = 93/221 (42.08%), Postives = 125/221 (56.56%), Query Frame = 1
Query:  229 FYRAGIAEFIATFLFLYISVLTVMG----VVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            F+RA +AEF+A  LF++IS+ + +G    V  + T  +      ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y++ QC+GAI    ++ G                +A G   G GLG EIIGT  LV  V + TD +R  RD  +    PL IG +V L HL  I  TG GINPARS G+++I    H + DHWIFWVGPFIG
Sbjct:   10 FWRAVVAEFLAMILFVFISIGSALGFNYPVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGI--TSSLPDNSLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVI---THNFKDHWIFWVGPFIG 221          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 7.652e-37
Identity = 95/227 (41.85%), Postives = 126/227 (55.51%), Query Frame = 1
Query:  229 FYRAGIAEFIATFLFLYISVLTVMG----------VVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            F+RA +AEF+A  LF++IS+ + +G          +V+ N K S         AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y++ QC+GAI    ++ G                +AHG   G GLG EIIGT  LV  V + TD +R  RD  +   APL IG +V L HL  I  TG GINPARS G+A++      + +HWIFWVGPFIG
Sbjct:   10 FWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSL--------AFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGI--TSSLVDNSLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIG 219          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 151.754 bits (382), Expect = 4.960e-36
Identity = 94/227 (41.41%), Postives = 126/227 (55.51%), Query Frame = 1
Query:  229 FYRAGIAEFIATFLFLYISVLTVMG----------VVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            F+RA +AEF+A  LF++IS+ + +G          +V+ N K S         AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+ Y++ QC+GAI  + ++ G                +A G   G GLG EIIGT  LV  V + TD +R  RD  +   APL IG +V L HL  I  TG GINPARS G+A++      + +HWIFWVGPFIG
Sbjct:   10 FWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVKVSL--------AFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGI--TSSLLENSLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIG 219          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.484e-35
Identity = 87/218 (39.91%), Postives = 124/218 (56.88%), Query Frame = 1
Query:  226 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            +F++A  AEF+A  +F+ +SV + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ +++FY+  QCLGAI GAG++  ++              V    T G GL  E+I TF LV+T+F++ D+KR+     V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IG
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSV----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIG 240          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.162e-35
Identity = 86/218 (39.45%), Postives = 124/218 (56.88%), Query Frame = 1
Query:  226 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            +F++A  AEF+A  +F+ +SV + +    S      V +  I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ +++FY+  QCLGAI GAG++  ++              V    T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP IG
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIG 243          
The following BLAST results are available for this feature:
BLAST of CF838768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
AQP1_BOVIN1.395e-3843.44Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP1.821e-3843.44Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_PIG3.107e-3842.99Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN4.057e-3843.38Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB2.014e-3742.92Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA5.859e-3742.08Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE7.652e-3741.85Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_RAT4.960e-3641.41Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP4_RAT5.484e-3539.91Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL7.162e-3539.45Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06I21_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838768 ID=CF838768; Name=CF838768; organism=Citrus sinensis; type=EST; length=881bp
GATCAAACAGCTACTTGCAAACGACTCAAATCTTTTGTGTCTTTTAGCTA
ATTAAGTGAAGAAGAGCGAGCGAAAATGGAGGGCAAAGAAGAGGACGTTA
GATTAGGAGCCAATAAGTTCACTGAGAGGCAACCGATTGGAACAGCAGCT
CAGAGCCAAGATGGCAAGGACTACGTTGAGCCGCCGCCGGCACCACTCTT
CGAGGAAGAAGAGCTCACGTCTTGGTCGTTTTACAGGGCCGGTATAGCCG
AGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTATTGACAGTGATG
GGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCATTCAAGGGAT
TGCATGGGCCTTCGGTGGCATGATCTTCGCGCTCGTTTACTGCACAGCTG
GCATCTCGGGTGGTCATATCAACCCGGCGGTGACATTCGGGCTGTTCTTG
GCGAGGAAGCTGTCGTTGACACGTGCACTTTTCTACATGGTCATGCAGTG
TCTGGGAGCCATCTGTGGTGCTGGCGTTGTAAAGGGTTTCATGGGTGCCG
GCCAATACGGGCGGCTCGGCGGCGGTGCCAATGCTGTAGCTCATGGCTAC
ACCAAGGGTGATGGTCTTGGTGCTGAGATTATTGGTACTTTTGTTCTTGT
CTACACAGTTTTCTCTGCCACTGATGCCAAACGTAGCGCCAGAGACTCTC
ATGTTCCTATTTTGGCTCCTTTGCCAATTGGGTTCGCTGTGTTCTTGGTT
CACTTGGCTACTATCCCTATTACCGGAACTGGCATCAACCCCGCAAGGAG
TCTTGGAGCTGCAATCATCTACAACAAGGACCACGGTTGGGATGACCATT
GGATTTTCTGGGTGGGACCATTCATTGGAGC
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