CF838768

Overview
NameCF838768
Unique NameCF838768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.545e-29
Identity = 84/221 (38.01%), Postives = 116/221 (52.49%), Query Frame = 1
Query:  220 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKS-NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            S SF+RA +AEF+ + L+      T++G+  S        G+ G A AFG     LV     +SGGHINPA+T    LA +LSL RAL Y++ Q LGA+ GAGV+ G                 + G   G G   E++ T   +  VF++ D +   R    P  A LP+GF++ L HL  IP TG G+NPARS   A+I      + +HW+FW GP +G
Sbjct:    6 SSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVG--PGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLG 211          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 3.443e-29
Identity = 75/218 (34.40%), Postives = 110/218 (50.46%), Query Frame = 1
Query:  226 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            + +R  +AEF+ TF  + I + + MG         T     IA+ FG ++  L      +SG HINPAVT GL +   +S+ +  FY+V QC+GAI GA ++K                 +    T G G+  E + TF+LV+ V    D +R    S +   APL IG ++   HL+ I  TG  +NPARS G A++      W D W++WVGP +G
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQ----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKA--ATPSDVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRR----SDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMG---NWTDQWVYWVGPIVG 225          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.443e-29
Identity = 79/221 (35.75%), Postives = 121/221 (54.75%), Query Frame = 1
Query:  220 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            S +F +A  AEF+AT +F++  + + +         +   +  I+ AFG  I  +      +SGGH+NPA+T  L +  ++SL RA+FY+V Q +GAI GA ++ G                + +  T G  + AE+I TF L   VFS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A+I ++      HW+FWVGP +G
Sbjct:    7 SAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL--APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFS--SAHWVFWVGPIVG 213          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.709e-28
Identity = 82/223 (36.77%), Postives = 120/223 (53.81%), Query Frame = 1
Query:  235 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            RA +AEF++TF+F++    +++ + K      ++T  +T G +  +A A    +FA V     +SGGH+NPAVTF   +  ++S+ RA++Y V Q +GAI         +              VA G ++  GL  EII TF LVY V+S A D KR +    + I+APL IG  V    L   P  G  +NPAR+ G A++      W +HWI+WVGPFIG
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILAC-----LLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALV---GWRWSNHWIYWVGPFIG 234          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.709e-28
Identity = 80/220 (36.36%), Postives = 113/220 (51.36%), Query Frame = 1
Query:  220 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT    +   +S  RA+FY+  Q LGA+ GA ++                  + +  T G  +  E+  T  LV  +F +TD +R  +  H      L IGF+V L HL  I  TG  +NPARSL  AI+  K   +DDHW+FW+GP +G
Sbjct:    6 SIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEI--TPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVG 211          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 126.331 bits (316), Expect = 2.232e-28
Identity = 75/218 (34.40%), Postives = 112/218 (51.38%), Query Frame = 1
Query:  226 SFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            + +R  +AEF+ TF  + I + +  G    +   +      IA+ FG ++  L      +SG HINPAVT GL +   +S+ +  FY+V QC+GAI GA V+K                 +A G + G G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARS G A++      + D W++WVGP +G
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPTLTQ-----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKA--ATPSEVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMG---NYTDLWVYWVGPIVG 224          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.806e-28
Identity = 82/218 (37.61%), Postives = 114/218 (52.29%), Query Frame = 1
Query:  235 RAGIAEFIATFLFLYISVLTVMGVVK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            RA +AEFI+T LF++  V + +   K  S+    T G+  IA   G  +F  V   A ISGGH+NPAVTFGL +  ++++   +FY + Q LG+         F+              VA G    +G+  EII TF LVYTV+ +A D K+ +    +  +APL IG  V    LA  P +G  +NPARS G A+      G   HW++WVGP IG
Sbjct:   19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAAC-----FLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSG---HWVYWVGPLIG 224          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.806e-28
Identity = 80/220 (36.36%), Postives = 113/220 (51.36%), Query Frame = 1
Query:  220 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            S +F RA  AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT    +   +S+ RA FY+  Q LGA+ GA ++                  +++  T G  +  E+  T  LV  +F++TD +R       P    L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW+GP +G
Sbjct:    6 SIAFSRAVFAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEI--TPADIRGDLAVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVG 211          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.446e-27
Identity = 79/220 (35.91%), Postives = 112/220 (50.91%), Query Frame = 1
Query:  220 SWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT    +   +S  RA+FY+  Q LGA+ GA ++                  + +  T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL  AI+  K   +DDHW+FW+GP +G
Sbjct:    6 SIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEI--TPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVG----TPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVG 211          
BLAST of CF838768 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.222e-27
Identity = 81/225 (36.00%), Postives = 120/225 (53.33%), Query Frame = 1
Query:  235 RAGIAEFIATFLFLYISVLTVMGVVK------SNTKCSTVG---IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSA-TDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHGWDDHWIFWVGPFIG 879
            RA +AEF++TF+F++ +  +++ + K      ++   +T G   +  +A AF   +FA V     +SGGH+NPAVTFG  +  +++  RA++Y + Q LGAI         +              +A G    +GL  EII TF LVY V+S   D KR +    + I+APL IG  V    L   P +G  +NPAR+ G A++      W DHWI+WVGPFIG
Sbjct:   24 RATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFA--LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILAC-----LLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALV---GWRWHDHWIYWVGPFIG 234          
The following BLAST results are available for this feature:
BLAST of CF838768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 190
Match NameE-valueIdentityDescription
MIP_CHICK1.545e-2938.01Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP_AEDAE3.443e-2934.40Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP5_SHEEP3.443e-2935.75Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
TIP32_ARATH1.709e-2836.77Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
AQP2_SHEEP1.709e-2836.36Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP_ANOGA2.232e-2834.40Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP21_ARATH3.806e-2837.61Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQP2_HUMAN3.806e-2836.36Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
AQP2_BOVIN1.446e-2735.91Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
TIP31_ARATH3.222e-2736.00Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06I21_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06I21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838768 ID=CF838768; Name=CF838768; organism=Citrus sinensis; type=EST; length=881bp
GATCAAACAGCTACTTGCAAACGACTCAAATCTTTTGTGTCTTTTAGCTA
ATTAAGTGAAGAAGAGCGAGCGAAAATGGAGGGCAAAGAAGAGGACGTTA
GATTAGGAGCCAATAAGTTCACTGAGAGGCAACCGATTGGAACAGCAGCT
CAGAGCCAAGATGGCAAGGACTACGTTGAGCCGCCGCCGGCACCACTCTT
CGAGGAAGAAGAGCTCACGTCTTGGTCGTTTTACAGGGCCGGTATAGCCG
AGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTATTGACAGTGATG
GGCGTCGTCAAGTCCAACACCAAGTGCTCAACCGTCGGCATTCAAGGGAT
TGCATGGGCCTTCGGTGGCATGATCTTCGCGCTCGTTTACTGCACAGCTG
GCATCTCGGGTGGTCATATCAACCCGGCGGTGACATTCGGGCTGTTCTTG
GCGAGGAAGCTGTCGTTGACACGTGCACTTTTCTACATGGTCATGCAGTG
TCTGGGAGCCATCTGTGGTGCTGGCGTTGTAAAGGGTTTCATGGGTGCCG
GCCAATACGGGCGGCTCGGCGGCGGTGCCAATGCTGTAGCTCATGGCTAC
ACCAAGGGTGATGGTCTTGGTGCTGAGATTATTGGTACTTTTGTTCTTGT
CTACACAGTTTTCTCTGCCACTGATGCCAAACGTAGCGCCAGAGACTCTC
ATGTTCCTATTTTGGCTCCTTTGCCAATTGGGTTCGCTGTGTTCTTGGTT
CACTTGGCTACTATCCCTATTACCGGAACTGGCATCAACCCCGCAAGGAG
TCTTGGAGCTGCAATCATCTACAACAAGGACCACGGTTGGGATGACCATT
GGATTTTCTGGGTGGGACCATTCATTGGAGC
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