CF838787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.581e-17 Identity = 43/86 (50.00%), Postives = 51/86 (59.30%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 273 P K HG P+D+ RH A F + D Q+ LSG SIIGR +VVH DDLGKGG E S TGNAG R+ACG+IG+ Sbjct: 64 PFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEKEDDLGKGGDEESLRTGNAGSRLACGVIGI 149
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_HYLLA (Superoxide dismutase [Cu-Zn] OS=Hylobates lar GN=SOD1 PE=2 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 4.403e-17 Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 273 P +KHG P+D+ RH A ++ D+ I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 67 PLSRKHGGPKDEERHVGDLGNVTADKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_RAT (Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod1 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.750e-17 Identity = 43/86 (50.00%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 273 P KKHG P D+ RH A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 67 PHSKKHGGPADEERHVGDLGNVAAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_MOUSE (Superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod1 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.750e-17 Identity = 43/86 (50.00%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 273 P KKHG P D+ RH A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 67 PHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_HORSE (Superoxide dismutase [Cu-Zn] OS=Equus caballus GN=SOD1 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 7.510e-17 Identity = 43/86 (50.00%), Postives = 53/86 (61.63%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 273 P KKHG P+D+ RH A + D+ I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 67 PLSKKHGGPKDEERHVGDLGNVTADENGKADVDMKDSVISLSGKHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLACGVIGI 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_CAPHI (Superoxide dismutase [Cu-Zn] OS=Capra hircus GN=SOD1 PE=2 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 7.510e-17 Identity = 43/86 (50.00%), Postives = 52/86 (60.47%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 273 P KKHG P+D+ RH A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAG +ACG+IG+ Sbjct: 65 PLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSCLACGVIGI 150
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_CANAL (Superoxide dismutase [Cu-Zn] OS=Candida albicans GN=SOD1 PE=3 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 7.510e-17 Identity = 45/86 (52.33%), Postives = 51/86 (59.30%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 273 P K+HG PEDD RH A T D I L G +SI+GR +VVHA DD GKGG E SKTTG+AG R ACG+IGL Sbjct: 67 PFGKQHGAPEDDERHVGDLGNISTDGNGVAKGTKQDLLIKLIGKDSILGRTIVVHAGTDDYGKGGFEDSKTTGHAGARPACGVIGL 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_PONPY (Superoxide dismutase [Cu-Zn] OS=Pongo pygmaeus GN=SOD1 PE=2 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 9.809e-17 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 273 P +KHG P+D+ RH A+ ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+ACG+IG+ Sbjct: 68 PLSRKHGGPKDEERHVGDLGNVTADKDGVASVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLACGVIGI 153
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_COLGL (Superoxide dismutase [Cu-Zn] OS=Colletotrichum gloeosporioides GN=SOD1 PE=3 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16 Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 25 KKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 273 K HG PED NRH + TV D+ + L GP S+IGR +VVH DDLGKG +E S TGNAG R ACG+IG+ Sbjct: 70 KTHGAPEDSNRHVGDLGNIETDANGNSKGTVTDSHVKLIGPESVIGRTIVVHGGTDDLGKGDNEESLKTGNAGPRPACGVIGI 152
BLAST of CF838787 vs. ExPASy Swiss-Prot
Match: SODC_ASHGO (Superoxide dismutase [Cu-Zn] OS=Ashbya gossypii GN=SOD1 PE=3 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 1.281e-16 Identity = 43/86 (50.00%), Postives = 51/86 (59.30%), Query Frame = 1 Query: 16 PCWKKHGPPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 273 P K HG PED+NRH A + D I + GP SI+GR VVVHA DDLG+GG+E S TGNAG R ACG+IG+ Sbjct: 67 PFKKTHGSPEDENRHVGDMGNVLADANGVAVGSAKDPLIKIFGPTSILGRTVVVHAGKDDLGRGGNEESLKTGNAGPRPACGVIGI 152 The following BLAST results are available for this feature:
BLAST of CF838787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838787 ID=CF838787; Name=CF838787; organism=Citrus sinensis; type=EST; length=429bpback to top |