CF838802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838802 vs. ExPASy Swiss-Prot
Match: NLTP3_HORVU (Non-specific lipid-transfer protein 3 OS=Hordeum vulgare GN=LTP3 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.396e-23 Identity = 54/118 (45.76%), Postives = 77/118 (65.25%), Query Frame = 2 Query: 2 KSQPSALKLVSALVLCILVTGPLSAQAITCGQVTGSLAPCIVYLR-SGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 ++ + L LV+ + +LV + AI+CGQV+ +L+PCI Y R +G PV CC+GV+ L AA++T D+Q AC CLK A SI +N G+P CGVS+P+ IS+STDC+KV Sbjct: 3 RAAATQLVLVAMVAAMLLVA---TDAAISCGQVSSALSPCISYARGNGAKPPVACCSGVKRLAGAAQSTADKQAACRCLKSLATSIKGINMGKVSGVPGKCGVSVPFPISMSTDCNKV 117
BLAST of CF838802 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.954e-22 Identity = 51/93 (54.84%), Postives = 62/93 (66.67%), Query Frame = 2 Query: 80 AITCGQVTGSLAPCIVYLRSGGPIPVPCC-NGVRSLNAAARTTPDRQTACNC-LKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 AI+CGQV+ ++ PC+ Y R G P C +GVRSLNAAARTT DR+ ACNC LK AA + LN A +P CGV +PY IS S DCS+V Sbjct: 1 AISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVSGLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of CF838802 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.357e-21 Identity = 53/113 (46.90%), Postives = 71/113 (62.83%), Query Frame = 2 Query: 17 ALKLVSALVLCILVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 AL + A+V +V SA A++CG VT S+APC+ Y+ P CC+GVR+LN A ++ DR+TAC+CLK A S NLN NA +P CGVS+ + IS S DCSK+ Sbjct: 9 ALVALVAVVAAAVVAERASA-AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CF838802 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.357e-21 Identity = 53/113 (46.90%), Postives = 71/113 (62.83%), Query Frame = 2 Query: 17 ALKLVSALVLCILVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 AL + A+V +V SA A++CG VT S+APC+ Y+ P CC+GVR+LN A ++ DR+TAC+CLK A S NLN NA +P CGVS+ + IS S DCSK+ Sbjct: 9 ALVALVAVVAAAVVAERASA-AVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120
BLAST of CF838802 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.357e-21 Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 2 Query: 26 LVSALVLCILVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPV-PCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 L++ ++ +L P +A AI CG V + PC+ Y++ GGP P CC+GV++L+ AR+ DRQ+ACNCLK A I NLN +NA +P CGV++PY IS++ DCS+V Sbjct: 5 LMAVALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQ-GGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of CF838802 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.149e-20 Identity = 51/118 (43.22%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 2 KSQPSALKLVSALVLCILVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIP-VPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 ++ + L LV+ + +LV AITCGQV+ +L PC Y + G P CC+GV+ L AR+T D+Q C CLK AG+ N A G+P CGVS+PY IS S DCSK+ Sbjct: 3 RTAATKLALVALVAAMLLVAADA---AITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGAY---NAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of CF838802 vs. ExPASy Swiss-Prot
Match: NLTP6_ARATH (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana GN=LTP6 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.500e-20 Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 38 LVLCILVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNP---NNAVGLPRACGVSIPYKISISTDCSKVR 355 L +C+++ A++C V L PC+ Y+ GGP+P CCNG+ +L + A+T+ DRQ C C+K A G + L+P NA+ LP CGV +PYK S STDC ++ Sbjct: 6 LAVCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGVCRCIKSAIGGL-TLSPRTIQNALELPSKCGVDLPYKFSPSTDCDSIQ 113
BLAST of CF838802 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.342e-20 Identity = 51/115 (44.35%), Postives = 74/115 (64.35%), Query Frame = 2 Query: 20 LKLVSALVLCILVTGPLSAQA-ITCGQVTGSLAPCIVYLRSGG-PIPVP-CCNGVRSLNAAARTTPDRQTACNCLKQAAGSI-PNLNPNNAVGLPRACGVSIPY--KISISTDCS 346 +KL + + ++ GP++A+A ++CG+V +L PC YL +GG P P CCNGVR LN TT DR+ AC C+K AA ++ P LN + A G+PR CG+ IPY +I +T C+ Sbjct: 5 MKLGCLVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVGPGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119
BLAST of CF838802 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.302e-19 Identity = 48/105 (45.71%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 38 LVLCILVTGPLSAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAGSIPNLNPNNAVGLPRACGVSIPYKISISTDCSKV 352 LV+ IL+ +AI C QV LA C+ YL++GG CCNG+ SL AAA DRQ ACNCLK A +IP +N + A LP CGV+I S + DC+ + Sbjct: 14 LVITILLGIAYHGEAIACPQVNMYLAQCLPYLKAGGNPSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDDFAKQLPAKCGVNIGVPFSKTVDCNSI 118
BLAST of CF838802 vs. ExPASy Swiss-Prot
Match: NLTPA_ARATH (Non-specific lipid-transfer protein 10 OS=Arabidopsis thaliana GN=LTP10 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18 Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 2 Query: 38 LVLCILVTGPL---SAQAITCGQVTGSLAPCIVYLRSGGPIPVPCCNGVRSLNAAARTTPDRQTACNCLKQAAG--SIPNLNPNNAVGLPRACGVSIPYKISISTDCSKVR 355 L LC+L+ S AI+C V +L PC+VY+ GG IP CCNG+R L+ A + D+Q C C+K G S ++ A LP CGV +PYKI ST+C+ ++ Sbjct: 6 LPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQATSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNCNSIK 116 The following BLAST results are available for this feature:
BLAST of CF838802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838802 ID=CF838802; Name=CF838802; organism=Citrus sinensis; type=EST; length=602bpback to top |