CF838829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF838829 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 8.450e-34 Identity = 83/164 (50.61%), Postives = 101/164 (61.59%), Query Frame = 1 Query: 118 GSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTT---TAVDKGPTKVTTASSTPAA 567 G G + + +G RKKLRLSKEQS LE KQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CEYLKR +LTE+NRRL +E+ ELRA+K P + LPA+TLSMCP CERV + TA P T+ ++ P A Sbjct: 153 GGGGERSSSRASDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMH------LPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTA 310
BLAST of CF838829 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.104e-33 Identity = 87/206 (42.23%), Postives = 115/206 (55.83%), Query Frame = 1 Query: 19 QAGGSAMKDLDINQVPSEDTEXXXXXXXXXXXXGSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQS 603 ++GG + V +E+ E + + DD+E G RKKLRLSKEQS LLE KQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE LKR +LTE+NRRL RE+++LRA+ + P+PA+TLS+CP CER+ T A G + A T +P + +P +S Sbjct: 47 ESGGQPQVVVKREVVRAEEEEYEYEYERALYSSSAAAADDDE-------GCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERLATAAAAAGASPTAAADRTNKPTAPHLFSPFAKS 245
BLAST of CF838829 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.211e-33 Identity = 85/155 (54.84%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 163 DGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVIS-PHSCEP---------LPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPA 564 D G RKKLRL+KEQS LLE KQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR +LTE+NRRLQRE++ELRA+K PP S H P LPA+TL++CP CERV A KV A T A Sbjct: 121 DDGSTRKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPA---SAAKVVAADGTKA 272
BLAST of CF838829 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.211e-33 Identity = 85/155 (54.84%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 163 DGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVIS-PHSCEP---------LPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPA 564 D G RKKLRL+KEQS LLE KQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE+LKR +LTE+NRRLQRE++ELRA+K PP S H P LPA+TL++CP CERV A KV A T A Sbjct: 121 DDGSTRKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPA---SAAKVVAADGTKA 272
BLAST of CF838829 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.193e-33 Identity = 89/171 (52.05%), Postives = 111/171 (64.91%), Query Frame = 1 Query: 118 GSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPH-SCEPLPASTLSMCPRCERVTTTA--VDKGPTKVTTAS----STPAALSP 576 GSG DDE+ N DG RKKLRLSK+Q+ +LE KQK LA QL L+ RQVEVWFQNRRAR+KLKQTE++CEYLKR +LTE+NRRLQ+EV ELRA+K +SPH P +TL+MCP CERV+++A V P+ TT + +P L+P Sbjct: 146 GSGGSDDEDGG--NGDGS--RKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALK------LSPHLYMHMTPPTTLTMCPSCERVSSSAATVTAAPSTTTTPTVVGRPSPQRLTP 306
BLAST of CF838829 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.594e-32 Identity = 87/206 (42.23%), Postives = 115/206 (55.83%), Query Frame = 1 Query: 19 QAGGSAMKDLDINQVPSEDTEXXXXXXXXXXXXGSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGPTKVTTASSTPAALSPKVGTPALQS 603 ++GG + V +E+ E + + DD+E G RKKLRLSKEQS LLE KQK LA QL L+PRQVEVWFQNRRAR+KLKQTE++CE LKR +LTE+NRRL RE+++LRA+ + P+PA+TLS+CP CER+ T A G + A T +P + +P +S Sbjct: 47 ESGGQPQVVVKREVVRAEEEEYEYEYERALYSSSAAAADDDE-------GCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERLATAAA-AGASPTAAADRTNKPTAPHLFSPFAKS 244
BLAST of CF838829 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 4.636e-32 Identity = 86/172 (50.00%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 124 GSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPL-PASTLSMCPRCERVTTTAVDKGPTKVTTASSTP-AALSPKVGTPALQ 600 G DDE+ S D RKKLRLSKEQ+ +LE KQK LA QL L+ RQVEVWFQNRRAR+KLKQTE++CEYLKR +LT++NRRLQ+EV ELRA+K +SPH + P +TL+MCP CERV T+ SS+P +SP P Q Sbjct: 145 GGSDDEDGSGNGDDSS--RKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALK------LSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMNSSSPMGPMSPWAAMPLRQ 308
BLAST of CF838829 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSJ (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.909e-32 Identity = 75/145 (51.72%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 118 GSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAV 519 GSGS D+ +++ +V GG RKKLRLSK+Q+ +LE KQK LA L L+PRQVEVWFQNRRAR+KLKQTE++CE+LKRW L + NRRL +E+ ELRA+K P +P + P P +TL+MC C+RV V Sbjct: 73 GSGSGDEVDDAGCDVGGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATP----TPPAAAP-PLTTLTMCLSCKRVANAGV 212
BLAST of CF838829 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSI (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. indica GN=HOX28 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 7.909e-32 Identity = 75/145 (51.72%), Postives = 97/145 (66.90%), Query Frame = 1 Query: 118 GSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVISPHSCEPLPASTLSMCPRCERVTTTAV 519 GSGS D+ +++ +V GG RKKLRLSK+Q+ +LE KQK LA L L+PRQVEVWFQNRRAR+KLKQTE++CE+LKRW L + NRRL +E+ ELRA+K P +P + P P +TL+MC C+RV V Sbjct: 73 GSGSGDEVDDAGCDVGGGGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATP----TPPAAAP-PLTTLTMCLSCKRVANAGV 212
BLAST of CF838829 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.349e-31 Identity = 81/175 (46.29%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 118 GSGSMDDEEESCINVDGGPPRKKLRLSKEQSRLLE-----------KQKEELATQLKLKPRQVEVWFQNRRARSKLKQTEMECEYLKRWFGSLTEQNRRLQREVEELRAMKVGP-PTVISPHSCEPLPASTLSMCPRCERVTTTAVDKGP--------TKVTTASSTPAALSPKV 582 GSG DD+ DG RKKLRLSK+Q+ +LE KQK LA +L L+PRQVEVWFQNRRAR+KLKQTE++CEYLKRW L ++N+RL++E+ +LRA+K P P S A+TL+MCP C RV T P + T +SS+ AA + V Sbjct: 99 GSGVDDDD-----GADGAGGRKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQPSSSAAATLTMCPSCRRVATAGAPHQPNHQQCHPKSNTTISSSSTAAAAVAV 268 The following BLAST results are available for this feature:
BLAST of CF838829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838829 ID=CF838829; Name=CF838829; organism=Citrus sinensis; type=EST; length=779bpback to top |