CF838835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23 Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 683 ++L ++ K L E PP G+ ++++ A I GP GTP+E+G F++ + S ++P+ PP FL+K+FHPN+ +G IC++ L+ W+P+ + +L ++ LL EP P S N QA ++ EN EY + Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23 Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 683 ++L ++ K L E PP G+ ++++ A I GP GTP+E+G F++ + S ++P+ PP FL+K+FHPN+ +G IC++ L+ W+P+ + +L ++ LL EP P S N QA ++ EN EY + Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23 Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 683 ++L ++ K L E PP G+ ++++ A I GP GTP+E+G F++ + S ++P+ PP FL+K+FHPN+ +G IC++ L+ W+P+ + +L ++ LL EP P S N QA ++ EN EY + Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23 Identity = 48/133 (36.09%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 683 ++L ++ K L E PP G+ ++++ A I GP GTP+E+G F++ + S ++P+ PP FL+K+FHPN+ +G IC++ L+ W+P+ + +L ++ LL EP P S N QA ++ EN EY + Sbjct: 7 RRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23 Identity = 58/152 (38.16%), Postives = 85/152 (55.92%), Query Frame = 3 Query: 258 NENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 N NLP +IK E + L P GI ++D+ I GP +PYE GVF+++L L ++P + PK FLTKI+HPNI G IC++ LK W+P+L +R VL+ ++ LL P P+ L+E K N E A+ +T ++A Sbjct: 3 NSNLPRRIIK----ETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVDTAKEWTRLYA 150
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBC2_MEDSA (Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.657e-23 Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 692 K+L ++ K L PP GI D++ A I GP TP++ G F++ L S D+P+ PP F++++FHPNI +G IC++ L+ W+P + +L ++ LL +P P S N +A +M EN EY R R Sbjct: 7 KRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 142
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBC2_WHEAT (Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.000e-22 Identity = 49/136 (36.03%), Postives = 80/136 (58.82%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 692 K+L ++ K L + PP GI +D++ + A I GP TP++ G F++ L + D+P+ PP F++++FHPNI +G IC++ L+ W+P + +L ++ LL +P P S N +A +M EN EY R R Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSENKREYNRKVR 142
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.306e-22 Identity = 57/152 (37.50%), Postives = 85/152 (55.92%), Query Frame = 3 Query: 258 NENLPPNVIKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 N NLP +IK E + L P GI ++++ I GP +PYE GVF+++L L ++P + PK FLTKI+HPNI G IC++ LK W+P+L +R VL+ ++ LL P P+ L+E K N E A+ +T ++A Sbjct: 3 NSNLPRRIIK----ETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYA 150
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.306e-22 Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 692 K+L ++ K L PP GI D+ A I GPA TP+E+G F++ L +P+ PP FL+K+FHPN+ NGE+C++ L+ W+P+ + +L ++ LL +P P S N +A + EN +EY R + Sbjct: 7 KRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNPNSPANAEAASLYRENMKEYVRRVK 142
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBE2A_MOUSE (Ubiquitin-conjugating enzyme E2 A OS=Mus musculus GN=Ube2a PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.706e-22 Identity = 46/133 (34.59%), Postives = 81/133 (60.90%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYAR 683 ++L ++ K L E PP G+ ++++ A I GP GTP+E+G F++ + + ++P+ PP F++K+FHPN+ +G IC++ L+ W+P+ + +L ++ LL EP P S N QA ++ EN EY + Sbjct: 7 RRLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEK 139 The following BLAST results are available for this feature:
BLAST of CF838835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838835 ID=CF838835; Name=CF838835; organism=Citrus sinensis; type=EST; length=845bpback to top |