CF838835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.800e-22 Identity = 54/143 (37.76%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 K++ KELK L + PP G +D A I GP +PY GVF + + D+P PPK F TK+FHPNI +NG IC++ LK+ W+P+L + VL+ + LL +P P+ L + M + +Y AR +T +A Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 146
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.800e-22 Identity = 53/143 (37.06%), Postives = 80/143 (55.94%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 K++ KELK L + PP G +D A I GP+ +PY GVF + + D+P PPK F TK+FHPN+ +NG IC++ LK+ W+P+L + VL+ + LL +P P+ L + M + +Y AR +T +A Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYA 146
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.800e-22 Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 K++ KELK L + PP G +D A I GP+ +PY GVF + + D+P PPK F TK+FHPNI +NG IC++ LK+ W+P+L + VL+ + LL +P P+ L + M + +Y AR +T +A Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYA 146
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 8.465e-22 Identity = 53/143 (37.06%), Postives = 79/143 (55.24%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 K++ KELK L + PP G +D A I GP +PY GVF + + D+P PPK F TK++HPNI +NG IC++ LK+ W+P+L + VL+ + LL +P P+ L + M + +Y AR +T +A Sbjct: 4 KRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYA 146
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.106e-21 Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 282 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + E+Y R AR +T +A Sbjct: 3 LKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 146
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.106e-21 Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 282 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + E+Y R AR +T +A Sbjct: 3 LKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 146
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.106e-21 Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 282 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + E+Y R AR +T +A Sbjct: 3 LKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 146
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.106e-21 Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 282 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + E+Y R AR +T +A Sbjct: 3 LKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 146
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.106e-21 Identity = 53/144 (36.81%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 282 IKQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 +K++ KEL L PP G DD A I GP +PY+ GVF + + D+P PPK F T+I+HPNI +NG IC++ L+ W+P+L + VL+ + LL +P P+ L + ++ + E+Y R AR +T +A Sbjct: 3 LKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYA 146
BLAST of CF838835 vs. ExPASy Swiss-Prot
Match: UBC4_YEAST (Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae GN=UBC4 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.444e-21 Identity = 55/143 (38.46%), Postives = 77/143 (53.85%), Query Frame = 3 Query: 285 KQLAKELKSLDESPPEGIKVGVNDDDFSTIFADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTKIFHPNIATNGEICVNTLKKDWNPSLGLRHVLIVVRCLLIEPFPESALNEQAGKMLLENYEEYARHARIYTGIHA 713 K++AKEL L+ PP G DD A I GPA +PY GVF + + D+P PPK F TKI+HPNI NG IC++ LK W+P+L L VL+ + LL + P+ L + + + +Y AR +T +A Sbjct: 5 KRIAKELSDLERDPPTSCSAGPVGDDLYHWQASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNINANGNICLDILKDQWSPALTLSKVLLSICSLLTDANPDDPLVPEIAHIYKTDRPKYEATAREWTKKYA 147 The following BLAST results are available for this feature:
BLAST of CF838835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838835 ID=CF838835; Name=CF838835; organism=Citrus sinensis; type=EST; length=845bpback to top |