CF838837
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838837 vs. ExPASy Swiss-Prot
Match: VDAC_NEUCR (Mitochondrial outer membrane protein porin OS=Neurospora crassa GN=B7H23.070 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.325e-11 Identity = 63/240 (26.25%), Postives = 103/240 (42.92%), Query Frame = 3 Query: 33 YTDIGKKARDLLYKDYQSDHKFTITTYS--PTGVAITSSGTKKGELFLADV---NTQLKNKNITTDLKVDTASNLFTTITV-DEPAPGLKT--ILSF-KVPDQRSGKVELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTI--TVGTQHILDPLTTLKARVNNAGIAS 719 ++DI K A DLL KD+ TI S P VA +G + + K +T +TA+ L T + + D A GLK I SF + R K L + L P N A++G G +D + T +A + ++ A++ + +ASYYH VN G++ + S T NT+ V T++ +DP++ +K ++N+ G+A+ Sbjct: 6 FSDIAKSANDLLNKDFYHLAAGTIEVKSNTPNNVAFKVTGKSTHDKVTSGALEGKFTDKPNGLTVTQTWNTANALETKVEMADNLAKGLKAEGIFSFLPATNARGAKFNLHFKQSNFHGRAFFDLLKGPTANIDAIVGHEGFLAGASAGYDVQKAAITGYSAAVGYHAPTYSAAITATDNLSVFSASYYHKVNSQVEAGSKATWN-SKTGNTVGLEVATKYRIDPVSFVKGKINDRGVAA 244
BLAST of CF838837 vs. ExPASy Swiss-Prot
Match: VDAC3_RAT (Voltage-dependent anion-selective channel protein 3 OS=Rattus norvegicus GN=Vdac3 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.325e-11 Identity = 71/277 (25.63%), Postives = 118/277 (42.60%), Query Frame = 3 Query: 33 YTDIGKKARDLLYKDYQSDH-KFTITTYSPTGVAITSSGTKKGELFLADVNTQLK----NKNITTDLKVDTASNLFTTITVDEP-APGLK-TILSFKVPD--QRSGKVELQYLHDYAGISTSVGLT-ANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVXHQAIEKSA-KFGLALALK 830 Y D+GK A+D+ K Y K + T S +GV ++SG + A N + K N + K +T + L T I+ + A GLK T+ + VP+ ++SGK++ Y D + + V + + P + AV+ G +SFD+ + N L + D ++N+ G S Y VN + + + + + ++ LD T+L A+VNNA + RP T+S V + K GL L+ Sbjct: 7 YCDLGKAAKDVFNKGYGFGMVKIDLKTKSCSGVEFSTSGHAYTDTGKASGNLETKYKVCNYGLIFTQKWNTDNTLGTEISWENKLAEGLKLTVDTIFVPNTGKKSGKLKASYRRDCFSVGSKVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLCQNNFALGYKAEDFQLHTHVND-GTEFGGSIYQRVNEKIETSINLAWTAGSNNTRFGIAAKYRLDCRTSLSAKVNNASLIGLGYTQSLRPGVKLTLSALVDGKNFNAGGHKVGLGFELE 282
BLAST of CF838837 vs. ExPASy Swiss-Prot
Match: VDAC_SCHPO (Probable mitochondrial outer membrane protein porin OS=Schizosaccharomyces pombe GN=SPAC1635.01 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.036e-11 Identity = 68/278 (24.46%), Postives = 119/278 (42.81%), Query Frame = 3 Query: 24 PGLYTDIGKKARDLLYKDYQSDHKF-TITTYSPTGVAITSSGTKKGE-LFLADVNTQLKNK--NITTDLKVDTASNLFTTITVDEP-APGLKTILSFKVPDQRSGK---VELQYLHDYAGISTSVGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTIT--VGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVXHQAIEKSA-KFGLALA 824 P Y I K DLL +D+ ++ T +P GV SG + + + + T +K +T TA+ L + + + E APGL ++ + K + L++ H SV + +G G + +D + GN + A + + + L +L +N ASYYH V+ G V ++T N IT + +++ LD T +K ++N+AG+A+ RP + ++ Q + + A K GL+LA Sbjct: 3 PPAYAAINKLCNDLLQRDFPVGATLLSVRTTAPNGVVFNVSGNQDAKGVISGKLETSFNDKANGLTISQGWTTANVLESKVGLSEQFAPGLHLNVNTTFSPATAAKTAILNLEHQHPLIHTHASVNALERKFLG-DFTVGHEGFLAGAEFGYDVQKGNVSNYAATIGYLASPLSVALQASNNLSVFRASYYHRVSSDVEAGGNVTWDAASTANAITLELASKYALDKDTFVKGKINSAGVATLSYFQTVRPGVTVGLGLQLDTQRLGQPAHKAGLSLA 279 The following BLAST results are available for this feature:
BLAST of CF838837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838837 ID=CF838837; Name=CF838837; organism=Citrus sinensis; type=EST; length=850bpback to top |