CF838900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_PYRIL (30S ribosomal protein S7P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps7p PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.273e-45 Identity = 96/189 (50.79%), Postives = 125/189 (66.14%), Query Frame = 3 Query: 126 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 V LF +W+FE+V V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN GKK A IVK A +II+ T QNPIQV+VDA+IN PRE+ TRI G+ +VD+SP RR++ A+ +T GAR +F N K I ECLADE+I AA SYA++K++E+ER+A A+R Sbjct: 40 VLLFGKWSFENVVVKDPGLRRYICLKPV----LLPHTEGRYQKHRFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDIIYYKTGQNPIQVLVDAIINVAPREEVTRIIMGGIAYTVSVDVSPQRRLDLALRWITEGARTCSFNNPKPIEECLADEIIAAASNDPRSYAVRKREELERIAAASR 224
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_SULSO (30S ribosomal protein S7P OS=Sulfolobus solfataricus GN=rps7p PE=3 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 6.887e-45 Identity = 96/194 (49.48%), Postives = 133/194 (68.56%), Query Frame = 3 Query: 111 SLTYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 +L D+K+F +W + V++ D SL YI + Y+PHT GR+ +RF KA+ PIVERL N +M GRN GKK +A IVK A +II+L T QNPIQV+V A+ NS PRE+ TRI G+V AVD+SP RR++ A+ + TGA++++F N K I E LA+E+I AA S S+AIK+K+EIER+A ++R Sbjct: 5 NLQLDIKVFGKWDTK-VEIRDPSLKKYISLMPV----YLPHTGGRHEHRRFGKAKVPIVERLINQIMRPGRNKGKKHLAYNIVKLAFDIIYLKTGQNPIQVLVRAIENSAPREEVTRIMYGGIVYYVAVDVSPQRRIDLALRHIATGAKDASFNNPKPIEEVLAEEIIAAANNDSKSFAIKRKEEIERIALSSR 193
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_SULTO (30S ribosomal protein S7P OS=Sulfolobus tokodaii GN=rps7p PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.534e-44 Identity = 96/190 (50.53%), Postives = 131/190 (68.95%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 D+K+F +W + V++ D SL YIG+ Y+PHT GR+ +RF KA+ PIVERL N++M GRN GKK++A IVK A +II L T QNPIQV+V A+ NS PRE+ TRI G+V AVD++P RRV+ A+ L GA+E++F N K I E LA+E+I AA S+AI+KK+EIER+A ++R Sbjct: 10 DLKVFGKWDTK-VEIRDPSLKKYIGLMPV----YLPHTGGRHEHRRFGKAKLPIVERLINNVMRPGRNKGKKMLAYNIVKTAFDIIALKTGQNPIQVLVKAIENSAPREEVTRIMYGGIVYYVAVDVAPQRRVDLALRHLVMGAKEASFNNPKPIEEALAEEIIAAASNDPKSFAIRKKEEIERIALSSR 194
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_DESK1 (30S ribosomal protein S7P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps7p PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.004e-44 Identity = 93/199 (46.73%), Postives = 135/199 (67.84%), Query Frame = 3 Query: 96 LKTHHSLTYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 ++T L ++KLFN+W+++ ++V D SL YI ++ Y+PH+ GR+ KRF KA PIVERL N++M GRN GKK +A IVK + E+I+L T +NP+QV+V A+ N+ PRE+ TRI G+ +VDI+PLRR++ A+ LT GAR AF N +I E LA+E+ AA SYA++KK+EIER+A ++R Sbjct: 4 MQTREMLIGEIKLFNKWSYDFIEVRDPSLKKYICLKPV----YLPHSGGRHEHKRFGKALVPIVERLINNVMRPGRNMGKKHLAYNIVKKSFELIYLKTGENPLQVLVRAIENAAPREETTRIMYGGITYHVSVDIAPLRRIDLALRHLTEGARLKAFHNPISIEEALAEEIALAASNDPKSYAVQKKEEIERIALSSR 198
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_DESMO (30S ribosomal protein S7P OS=Desulfurococcus mobilis GN=rps7p PE=3 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 4.464e-44 Identity = 91/190 (47.89%), Postives = 129/190 (67.89%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 ++KLFN+W+++ ++V D SL YI ++ Y+PHT GR+ +RF K PIVERL N +M GRN GKK +A IVK A +IIH+ T +NPIQV+V A+ N+ PRE+ TRI G+ +VD++PLRR++ A+ LT GAR AF + I E LA+E++ AA SYAI+KK+EIER+A ++R Sbjct: 13 EIKLFNKWSYDFIEVRDPSLKKYICLKPV----YLPHTGGRHEHRRFGKTHVPIVERLINKVMRPGRNMGKKHLAYHIVKKAFDIIHIKTGENPIQVLVRAIENAAPREETTRIMYGGITYHVSVDVAPLRRIDLALRHLTEGARMKAFHSPIPIEEALAEEIVLAASNDPKSYAIQKKEEIERIALSSR 198
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_THENV (30S ribosomal protein S7P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps7p PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.830e-44 Identity = 92/187 (49.20%), Postives = 124/187 (66.31%), Query Frame = 3 Query: 132 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 LF +W+FE+V V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN GKK A IVK A +I++ T QNPIQV +DA++N+ PRE+ TRI G+ +VD+SP RR++ A+ +T GAR +F N K I ECLADEL+ AA SYA++K++E+ER+A A+R Sbjct: 42 LFGKWSFENVVVRDPGLRRYICLKPV----VLPHTEGRYQNYRFGKARIPIVERLINLMMRPGRNAGKKHKAYNIVKRAFDIVYYKTGQNPIQVFIDAIVNTAPREEITRIIMGGIAYSVSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADELVAAAANDPKSYAVRKREELERIAAASR 224
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_METKA (30S ribosomal protein S7P OS=Methanopyrus kandleri GN=rps7p PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.830e-44 Identity = 92/191 (48.17%), Postives = 132/191 (69.11%), Query Frame = 3 Query: 120 YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 Y++K+F +W +V+V D L DYI ++ Y+PHT GR++ KRF KA+ PIVERL N +M +N GKK +A IVK A +IIH T +NPIQV+V A+ N+ PRE+ T I G+ +AVD SP RR++ A+ L+T GA++ AFRN K I ECLA+E+I AA+ + ++I++K+EIER+A+A R Sbjct: 11 YEMKVFGKWDPTEVEVRDPGLKDYICLKPM----YLPHTGGRHAKKRFAKAEVPIVERLINRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISYHEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEECLAEEIIAAARYDTECHSIRRKEEIERIAEAAR 197
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_PYRAE (30S ribosomal protein S7P OS=Pyrobaculum aerophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.615e-44 Identity = 91/189 (48.15%), Postives = 125/189 (66.14%), Query Frame = 3 Query: 126 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 + LF +W++EDV V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN GKK A IVK A ++I+ T +NP+QV +DA+IN+ PRE+ TRI G+ +VD+SP RR++ A+ +T GAR +F N K I ECLADE+I AA SYA++K++E+ER+A A+R Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPV----ILPHTEGRYQNTRFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYSVSVDVSPQRRLDLALRWITEGARACSFNNPKPIEECLADEIIAAAANDPKSYAVRKREELERIAAASR 223
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_METJA (30S ribosomal protein S7P OS=Methanocaldococcus jannaschii GN=rps7p PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.945e-44 Identity = 95/191 (49.74%), Postives = 131/191 (68.59%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 692 ++K+F RW+ +DV V D L +YI + YVPHTAGRY+ ++F KA+ IVERL N +M N GKKL A++IV++A EII T QNPIQV+VDA+ N+GPRED TRI G+V Q+VD S LRR++ A+ + GA +A ++ K I E LA+E+I AA+G SYA++KK+E ERVA++ R Sbjct: 5 EIKVFGRWSTKDVVVKDPGLRNYINLTPI----YVPHTAGRYTKRQFEKAKMNIVERLVNKVMRREENTGKKLKALKIVENAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGGIVYLQSVDCSSLRRIDVALRNIALGAYMAAHKSKKPIEEALAEEIIAAARGDMQKSYAVRKKEETERVAQSAR 191
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_SULAC (30S ribosomal protein S7P OS=Sulfolobus acidocaldarius GN=rps7p PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42 Identity = 94/190 (49.47%), Postives = 130/190 (68.42%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 +VK+F +W + V+V D SL YI + + Y+PHT GR+ +RF K++ PIVERL N+LM GRN GKK++A IVK +II + T QNPIQV+V A+ N+ PRE+ TRI G+V AVD++P RRV+ A+ L TGA E++F N K I E LA+E+I AA + S AI+KK+EIER+A ++R Sbjct: 11 NVKVFGKWDTK-VEVRDPSLKKYIDLMSI----YLPHTGGRHEHRRFGKSRIPIVERLINNLMRPGRNKGKKMLAYNIVKTTFDIIAVKTGQNPIQVLVRAIENAAPREEVTRIMYGGIVYYVAVDVAPQRRVDLALRHLVTGASEASFNNPKPIEEALAEEIIAAANNDNKSVAIRKKEEIERIALSSR 195 The following BLAST results are available for this feature:
BLAST of CF838900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838900 ID=CF838900; Name=CF838900; organism=Citrus sinensis; type=EST; length=824bpback to top |