CF838900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_METMP (30S ribosomal protein S7P OS=Methanococcus maripaludis GN=rps7p PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.449e-42 Identity = 96/191 (50.26%), Postives = 125/191 (65.45%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 692 ++KLF +W E V V D SL YI V VPHTAGR S K F K++ IVERL N LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A + GA ESA +N KT+A+CLADELI A+K S+A+KKK+E ERVA++ R Sbjct: 2 EIKLFGKWDSETVAVKDPSLKSYISVAPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASESAHKNKKTVAQCLADELIFASKADMQKSFAVKKKEEKERVAQSAR 188
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_METM5 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps7p PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.074e-41 Identity = 93/191 (48.69%), Postives = 125/191 (65.45%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 692 ++KLF +W E V V D SL YI V VPHTAGR + K F KA+ IVERL N LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A + GA +SA +N KT+A+CLADE+I A+K S+A++KK+E ERVA++ R Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYISVAPV----LVPHTAGRNTKKSFDKAKMNIVERLANKLMANQNNTGKKHETLAIVEEALAIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASDSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKKEEKERVAQSAR 188
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_METM7 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps7p PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.708e-41 Identity = 92/191 (48.17%), Postives = 125/191 (65.45%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 692 ++KLF +W E V V D SL Y+ V VPHTAGR S K F K++ IVERL N LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A + GA +SA +N KT+A+CLADE+I A+K S+A++KK+E ERVA++ R Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYVSVAPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQENTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASQSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKKEEKERVAQSAR 188
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_METM6 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps7p PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.708e-41 Identity = 92/191 (48.17%), Postives = 125/191 (65.45%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 692 ++KLF +W E V V D SL Y+ V VPHTAGR S K F K++ IVERL N LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A + GA +SA +N KT+A+CLADE+I A+K S+A++KK+E ERVA++ R Sbjct: 2 EIKLFGKWDSETVTVKDPSLKSYVSVTPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASQSAHKNKKTVAQCLADEIIFASKADMQKSFAVRKKEEKERVAQSAR 188
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_ARCFU (30S ribosomal protein S7P OS=Archaeoglobus fulgidus GN=rps7p PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.911e-40 Identity = 87/190 (45.79%), Postives = 127/190 (66.84%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 ++ +F ++ +VQ++D +L YI ++ YVPH GR++ F K + IVERL N +M G N GKK++A IVK A EII T +NPIQV+VDA+IN+GPRE+ R+ G+ +AVD S RRV+ A+ + GAR +AF++ ++IA+CLADE+I AA S S+A+ KK+E+ERVAK+ R Sbjct: 9 ELLVFGKYDPSEVQISDPALESYICLEPK----YVPHNHGRHANVPFAKQKVFIVERLINKVMRKGHNTGKKILAYNIVKEAFEIIEKKTKKNPIQVLVDAIINAGPREEVVRLKYGGIAVPKAVDTSSSRRVDIALRNIAEGARRAAFKSKRSIAQCLADEIIAAANNESRSFAVAKKEEVERVAKSAR 194
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_METST (30S ribosomal protein S7P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps7p PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.941e-39 Identity = 86/186 (46.24%), Postives = 127/186 (68.28%), Query Frame = 3 Query: 129 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 686 KLF++W +V V D+ L +Y+ + VPHT GR+ ++F K++ IVERL N +M RN+GKK A IV+ A+EII+ T QNP+QV+V AV N+ PRE+ TRI G+ + AVDI+P RRV+ ++ +T GA +SAF+N K+ A+CLADE++ A+ S S+A++KK+E ERVA++ Sbjct: 4 KLFDKWDVTEVTVEDMGLQNYVCLDEI----VVPHTMGRHVKRQFAKSKVSIVERLMNKIMRTERNSGKKNKAYSIVEDALEIINNKTKQNPVQVLVKAVENTAPREETTRIKYGGIGYQIAVDIAPQRRVDLSLGFITKGAMQSAFKNKKSAAQCLADEILLASDEDSRSFAVQKKEEKERVARS 185
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_METTH (30S ribosomal protein S7P OS=Methanobacterium thermoautotrophicum GN=rps7p PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.324e-39 Identity = 83/185 (44.86%), Postives = 130/185 (70.27%), Query Frame = 3 Query: 132 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKA 686 +F++W ++V+V D+ L+ YI + + VPHT GR+ ++F K++ IVERL N +M RN+GKK A +IV+ A EII+ T +NP+Q++V AV N+ PRE+ TRI G+ + AVDISP RRV+ ++ +T GA ++AF+N K+I ECLA+E++ AA+ + S+AI+KK+E ER+A++ Sbjct: 4 VFDKWELDEVKVEDMGLAKYICLDSI----LVPHTMGRHVKRQFAKSKVSIVERLINKVMRTERNSGKKNKAYKIVQEAFEIINRRTKENPVQILVKAVENTSPREETTRIKYGGIGYQVAVDISPQRRVDLSLGFITRGAMQAAFKNKKSIEECLANEIMLAAEYDTRSFAIQKKEEKERIARS 184
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_META3 (30S ribosomal protein S7P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps7p PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 7.375e-39 Identity = 84/191 (43.98%), Postives = 128/191 (67.02%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 692 ++KLFN+W ++ V D SL YI ++ +VPHT+GR S + F KA+ IVERL N+LM +N G+K + + IV+ A EII T++NP++V+V+A+ N GPRE+ TRI G+ Q+VD+SP RR++ A+ + G SA +N K+ A+CLADE++ A+K S+A++KK+E ERVA++ R Sbjct: 2 EIKLFNKWDTTEIVVKDPSLRHYINLEPI----FVPHTSGRNSGRMFEKAKMNIVERLVNNLMRAEQNTGQKQVTLSIVEEAFEIIEKRTNENPVKVLVEALENGGPREETTRISYGGIAFLQSVDVSPSRRLDTALRNIAIGTLNSAHKNKKSAAQCLADEIMFASKADMQRSFAVRKKEEKERVAQSAR 188
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_CALMQ (30S ribosomal protein S7P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps7p PE=3 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 7.375e-39 Identity = 82/189 (43.39%), Postives = 119/189 (62.96%), Query Frame = 3 Query: 126 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 692 + LF +W DV + D L Y+ ++ +PHT G+Y ++F KA PI+ER+ N LM GRN GKK A +I+K A +II++ T +NP+QV VDAV+N PRE+ TR+ G+ +VD+ P RR++ AI + GAR +F N + I ECLA+E+I AA SYA++++DE+ERVA R Sbjct: 40 ILLFGKWNVNDVVIRDPGLRRYMCLKPM----LLPHTEGKYQNRKFGKAMIPIIERMMNQLMKPGRNAGKKQKAYKILKTAFDIIYVATGKNPVQVFVDAVVNVAPREEITRVIYGGIAYPVSVDVGPTRRLDLAIRWIAEGARACSFNNPRPIEECLANEIIAAANNDPASYALRRRDEMERVAATAR 224
BLAST of CF838900 vs. ExPASy Swiss-Prot
Match: RS7_METVS (30S ribosomal protein S7P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps7p PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 3.660e-38 Identity = 86/191 (45.03%), Postives = 123/191 (64.40%), Query Frame = 3 Query: 123 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGS-SNSYAIKKKDEIERVAKANR 692 ++KLF +W V V D SL +I + + +PHTAGR S K F K + +VERL N LM N GKK + I++ A+ I+ T +NPIQV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A ++ GA + A ++ K+IA+CLADEL+ A+K S+A+KKK+E ERVA++ R Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISL----NPVLIPHTAGRNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLADELVAASKADMQKSFAVKKKEEKERVAQSAR 194 The following BLAST results are available for this feature:
BLAST of CF838900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CF838900 ID=CF838900; Name=CF838900; organism=Citrus sinensis; type=EST; length=824bpback to top |