CF838912

Overview
NameCF838912
Unique NameCF838912
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF838912 vs. ExPASy Swiss-Prot
Match: UFOG1_MANES (Anthocyanidin 3-O-glucosyltransferase 1 OS=Manihot esculenta GN=GT1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.496e-19
Identity = 64/214 (29.91%), Postives = 99/214 (46.26%), Query Frame = 2
Query:   98 NEDTSCISWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIR----PSSNNAPEGIDLLPEVLAEAVQENGC----IVKWAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNA--------RYVSHVWRTGXXXXXXXXXXXXXKAVRRLMVGEEGEEMKQRAKNLKEEIELCITEGGSSYKSLNEFLE 691
            N +   + WL++Q P SV+++  GS  S  K + +E+A  L +S   FLW +     P    +P   + L EVL E   E       ++ WAPQ  VL+H A GG  SH GWNS LE +  GVP+   P + +Q+ NA          V                    + +R LM  +   + +++ K + E+    + EGGSSY  L+  ++
Sbjct:  234 NTNQEIMQWLDDQPPSSVVFLCFGSNGSFSKDQVKEIACALEDSGHRFLWSLADHRAPGFLESPSDYEDLQEVLPEGFLERTSGIEKVIGWAPQVAVLAHPATGGLVSHSGWNSILESIWFGVPVATWPMYAEQQFNAFQMVIELGLAVEIKMDYRNDSGEIVKCDQIERGIRCLM--KHDSDRRKKVKEMSEKSRGALMEGGSSYCWLDNLIK 445          
BLAST of CF838912 vs. ExPASy Swiss-Prot
Match: UFOG_PETHY (Anthocyanidin 3-O-glucosyltransferase OS=Petunia hybrida GN=RT PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.788e-12
Identity = 56/186 (30.11%), Postives = 86/186 (46.24%), Query Frame = 2
Query:  119 SWLNNQAPESVIYVSLGSVASMDKKEPEEMAWGLVNSKQPFLWVIRPSSNNAPEGIDL-------LPEVLAEAVQENGCIVK-WAPQKEVLSHVAVGGFWSHCGWNSTLECLCEGVPMICRPCFGDQRVNARYVSHVWRTGXXXXXXXXXXXXXK-----AVRRLMVGEE---GEEMKQRAKNLKE 628
            +WLN     +VIY S GS   +   + +E+A GL  +  PF  V+     N P  +D+       LPE   E V++ G I   W  Q+ +L+H +VG +  H G++S +E L     ++  P  GDQ +NA+ VS     G             K     AV ++MV  E   G+ +++  K  KE
Sbjct:  265 TWLNKFEGGTVIYCSFGSETFLTDDQVKELALGLEQTGLPFFLVL-----NFPANVDVSAELNRALPEGFLERVKDKGIIHSGWVQQQNILAHSSVGCYVCHAGFSSVIEALVNDCQVVMLPQKGDQILNAKLVSGDMEAGVEINRRDEDGYFGKEDIKEAVEKVMVDVEKDPGKLIRENQKKWKE 445          
The following BLAST results are available for this feature:
BLAST of CF838912 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
UFOG1_MANES7.496e-1929.91Anthocyanidin 3-O-glucosyltransferase 1 OS=Manihot... [more]
UFOG_PETHY1.788e-1230.11Anthocyanidin 3-O-glucosyltransferase OS=Petunia h... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_06P12_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa06P12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF838912 ID=CF838912; Name=CF838912; organism=Citrus sinensis; type=EST; length=765bp
CATCATTGCCTTTAACTTCACAGCAATGCCAGGTTCCAGTCTTCCCAACT
TGCCCTTTCACAAATTTGCACCATTCTCCACCTCTTGCAGCTTTCTTAAC
GAGGACACCAGCTGCATTTCATGGCTTAACAACCAGGCTCCTGAATCTGT
TATATATGTTAGCTTGGGGAGCGTGGCATCAATGGATAAGAAAGAGCCAG
AGGAGATGGCTTGGGGTCTCGTTAACAGTAAGCAGCCATTCTTATGGGTG
ATTAGGCCCAGCTCAAATAATGCTCCAGAAGGGATAGATTTGCTGCCTGA
GGTTCTTGCAGAAGCAGTTCAAGAAAACGGATGCATTGTGAAATGGGCAC
CACAGAAGGAGGTTCTGTCTCATGTTGCAGTAGGAGGGTTCTGGAGTCAT
TGTGGTTGGAATTCGACACTGGAATGTTTATGCGAAGGGGTTCCAATGAT
ATGCAGACCATGTTTCGGAGACCAGAGGGTGAATGCGAGGTATGTGAGTC
ATGTATGGAGAACAGGCTTGGAGTTGGAAAATGAGTTGGAGAGAGAAGTG
GTAGAGAAAGCTGTAAGAAGGCTAATGGTCGGTGAGGAGGGAGAAGAGAT
GAAGCAGAGAGCTAAGAATTTGAAAGAAGAGATTGAACTTTGTATTACCG
AAGGTGGTTCTTCTTACAAATCGTTGAATGAGTTTCTAGAGTTCATCAAC
TAGTTTTAACTGTATAGGCAGGTTTTTGGTTCTTGGCAGAGTCATTATCA
ACAATCATGCCTAAA
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